Gene
RNA
| Item | Value |
|---|---|
| gene id | G937601 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 5761529 ~ 5762150 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1069363 | False | 544 | lncRNA | 0.36 | 3 | 5761529 | 5762150 |
| TU1069364 | True | 505 | lncRNA | 0.36 | 4 | 5761529 | 5762150 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535182 | prdm14 | coding | upstream | 322170 | 5432326 ~ 5439359 (+) |
| LOC110536532 | LOC106579720 | coding | upstream | 332083 | 5193181 ~ 5518848 (+) |
| LOC100136147 | tram1 | coding | upstream | 576722 | 5168887 ~ 5184807 (+) |
| LOC118937293 | NA | coding | upstream | 797865 | 4959044 ~ 4963664 (+) |
| eya1 | LOC106590661 | coding | upstream | 805344 | 4819745 ~ 4956185 (+) |
| LOC110535189 | LOC106579706 | coding | downstream | 266510 | 6028660 ~ 6038322 (+) |
| LOC110536599 | LOC106579705 | coding | downstream | 279692 | 6041842 ~ 6098398 (+) |
| LOC110535186 | LOC106579708 | coding | downstream | 365225 | 6127375 ~ 6139717 (+) |
| LOC110535188 | LOC106579710 | coding | downstream | 379565 | 6141715 ~ 6148083 (+) |
| LOC110535195 | LOC106579699 | coding | downstream | 490832 | 6252982 ~ 6498275 (+) |
| G937561 | NA | non-coding | upstream | 70716 | 5677931 ~ 5690813 (+) |
| G937469 | NA | non-coding | upstream | 144871 | 5601485 ~ 5616658 (+) |
| G937464 | NA | non-coding | upstream | 167943 | 5592100 ~ 5593586 (+) |
| G937439 | NA | non-coding | upstream | 211261 | 5549586 ~ 5550268 (+) |
| G937438 | NA | non-coding | upstream | 213930 | 5546407 ~ 5547599 (+) |
| G937611 | NA | non-coding | downstream | 19872 | 5782022 ~ 5782416 (+) |
| G937612 | LOC100194703 | non-coding | downstream | 20985 | 5783135 ~ 5783369 (+) |
| G937615 | NA | non-coding | downstream | 25031 | 5787181 ~ 5787600 (+) |
| G937619 | NA | non-coding | downstream | 31183 | 5793333 ~ 5793535 (+) |
| G937620 | NA | non-coding | downstream | 35894 | 5798044 ~ 5798331 (+) |
| G937237 | NA | other | upstream | 256200 | 5504704 ~ 5505329 (+) |
| G937096 | xkr9 | other | upstream | 616964 | 5143317 ~ 5144565 (+) |
| G937051 | NA | other | upstream | 733384 | 5019905 ~ 5028145 (+) |
| G935977 | NA | other | upstream | 1779331 | 3981851 ~ 3982198 (+) |
| G935976 | NA | other | upstream | 1780378 | 3980771 ~ 3981151 (+) |
| G937889 | NA | other | downstream | 359434 | 6121584 ~ 6122269 (+) |
| G938723 | NA | other | downstream | 1257001 | 7019151 ~ 7021424 (+) |
| G939408 | NA | other | downstream | 1812202 | 7574352 ~ 7574909 (+) |
| G939544 | NA | other | downstream | 2058370 | 7820520 ~ 7823317 (+) |
| G939690 | NA | other | downstream | 2378116 | 8140266 ~ 8140583 (+) |
