G937615



Basic Information


Item Value
gene id G937615
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 5787181 ~ 5787600 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1069385
caggagagagatttgctgggaggtcattgcagagattttgctagagagatttgttagagatttggaggtagggattgctgagagattttgctagaggttgattttctAGGAGGTCATTGCTGAGAGTGGGTATGTtctgagtttgttgctcaggtagagcttatttgatgtcctttgtttcttagtttgtttgtgaaattgtttaatattctgtttcatttgttcccaggggggaaggggaaggcaccttgggagtgcttaggcaagaggcccgcgggcatacatatacccgtagtatattcactgtctaggcacactaggtaagacctgggcggaccaccccctgtattttggttagggcaccaggtggtgctaaattaggtaagtagtgggtaggcaggtaagataggagaggggggg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1069385 True 420 lncRNA 0.47 1 5787181 5787600
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110535182 prdm14 coding upstream 347822 5432326 ~ 5439359 (+)
LOC110536532 LOC106579720 coding upstream 357735 5193181 ~ 5518848 (+)
LOC100136147 tram1 coding upstream 602374 5168887 ~ 5184807 (+)
LOC118937293 NA coding upstream 823517 4959044 ~ 4963664 (+)
eya1 LOC106590661 coding upstream 830996 4819745 ~ 4956185 (+)
LOC110535189 LOC106579706 coding downstream 241060 6028660 ~ 6038322 (+)
LOC110536599 LOC106579705 coding downstream 254242 6041842 ~ 6098398 (+)
LOC110535186 LOC106579708 coding downstream 339775 6127375 ~ 6139717 (+)
LOC110535188 LOC106579710 coding downstream 354115 6141715 ~ 6148083 (+)
LOC110535195 LOC106579699 coding downstream 465382 6252982 ~ 6498275 (+)
G937612 LOC100194703 non-coding upstream 3812 5783135 ~ 5783369 (+)
G937611 NA non-coding upstream 4765 5782022 ~ 5782416 (+)
G937601 NA non-coding upstream 25031 5761529 ~ 5762150 (+)
G937561 NA non-coding upstream 96368 5677931 ~ 5690813 (+)
G937469 NA non-coding upstream 170523 5601485 ~ 5616658 (+)
G937619 NA non-coding downstream 5733 5793333 ~ 5793535 (+)
G937620 NA non-coding downstream 10444 5798044 ~ 5798331 (+)
G937624 NA non-coding downstream 17981 5805581 ~ 5805821 (+)
G937631 NA non-coding downstream 37494 5825094 ~ 5826605 (+)
G937655 NA non-coding downstream 126624 5914224 ~ 5914459 (+)
G937237 NA other upstream 281852 5504704 ~ 5505329 (+)
G937096 xkr9 other upstream 642616 5143317 ~ 5144565 (+)
G937051 NA other upstream 759036 5019905 ~ 5028145 (+)
G935977 NA other upstream 1804983 3981851 ~ 3982198 (+)
G935976 NA other upstream 1806030 3980771 ~ 3981151 (+)
G937889 NA other downstream 333984 6121584 ~ 6122269 (+)
G938723 NA other downstream 1231551 7019151 ~ 7021424 (+)
G939408 NA other downstream 1786752 7574352 ~ 7574909 (+)
G939544 NA other downstream 2032920 7820520 ~ 7823317 (+)
G939690 NA other downstream 2352666 8140266 ~ 8140583 (+)

Expression


G937615 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
End of interactive chart.

G937615 Expression in each Bioproject

Bar chart with 18 bars.
G937615 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network