XLOC_028551



Basic Information


Item Value
gene id XLOC_028551
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 10346738 ~ 10348612 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00057327
TGCAGactttaatcttattttttggATGTGGTTTAGATGAAGTGCTCAGCACTGTAGGCTGAAGTGACAGGTATGGTTTGCGGgcacatgtgtgtgtctgtgtgggagtgtgtgggaGTGCTCCAATAACACTGAGCTTCACATATGCTGCTGTCCTGCTCTAGCATATGGCGTGTCCCTGGTGCTGGTAGGGAATCCTGTATCTATGTCATAGCTGGCACACCCGGACTCAGGGAGGGGAAGATTAGACCAGGCTACAGTGAacacagGATGTCGAGAGACCTGTTCAAACACTGCTTCACCAATCGTAGTACTGGGCAGTACTACAGAAGAGGAAGATGCCAACATAGATGACCCCACCATTCTGTCTGAAAGGactttttaattagtttattgagaaatttatttcaaattaaagtACTCAATGAAAATGTCTGGCAGTGTTTTT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00057327 True 448 lncRNA 0.45 2 10346738 10348612

Neighbor


gene id symbol gene type direction distance location
XLOC_028550 si:dkey-22l11.6 coding downstream 437367 9901116 ~ 9909371 (-)
XLOC_028549 adm2a coding downstream 454864 9880647 ~ 9891874 (-)
XLOC_028548 glt8d2 coding downstream 478895 9843923 ~ 9867843 (-)
XLOC_028547 ttc41 coding downstream 510396 9824063 ~ 9836342 (-)
XLOC_028546 parp12b coding downstream 524219 9813753 ~ 9822519 (-)
XLOC_028552 tspan12 coding upstream 226210 10574822 ~ 10599062 (-)
XLOC_028553 BX897748.1 coding upstream 312949 10661561 ~ 10661677 (-)
XLOC_028554 NA coding upstream 400365 10748977 ~ 10752941 (-)
XLOC_028555 NA coding upstream 417402 10766014 ~ 10835620 (-)
XLOC_028556 NA coding upstream 423262 10771874 ~ 10785654 (-)
XLOC_028540 BX901962.1 non-coding downstream 694770 9649283 ~ 9651968 (-)
XLOC_028534 NA non-coding downstream 824796 9514548 ~ 9521942 (-)
XLOC_028533 NA non-coding downstream 957090 9388818 ~ 9389648 (-)
XLOC_028527 NA non-coding downstream 1295793 9048306 ~ 9050945 (-)
XLOC_028525 NA non-coding downstream 1441285 8904291 ~ 8905453 (-)
XLOC_028568 BX784029.1 non-coding upstream 776001 11124613 ~ 11132617 (-)

Expression



Co-expression Network