G937851


Basic Information

Item Value
gene id G937851
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 6148427 ~ 6148791 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1069628
aagagatggagggggaggagcctACAGCCATAGATGAGTATGGACGAAATGGCCGGGGTCACTTTGGAACAATGAAAGAACTTAACCAGACCTGAGTTATGAAACCAAACCATTATGGGTTAAAAACTATGACTGTTCTAAAGCGATGTGATCTAGGTGAAGACTATGAGATGTCATGTTGATCACCATTATCACAGGATAGTCAAAtggcaactttttttttttttcaataacacCATGACTAAACAGTTTTGAAAACTAAGCCCACGAAAACGGCATGAAGAACAATGGATCATAATACTGTTCACATTATATACTTTGATCCCCAAAACATACCTACAGATAAATCATTTAGTTCAGATTAG

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1069628 True 365 lncRNA 0.38 1 6148427 6148791

Neighbor

gene id symbol gene type direction distance location
LOC110535188 LOC106579710 coding upstream 344 6141715 ~ 6148083 (+)
LOC110535186 LOC106579708 coding upstream 8710 6127375 ~ 6139717 (+)
LOC110536599 LOC106579705 coding upstream 50029 6041842 ~ 6098398 (+)
LOC110535189 LOC106579706 coding upstream 110105 6028660 ~ 6038322 (+)
LOC110535182 prdm14 coding upstream 709068 5432326 ~ 5439359 (+)
LOC110535195 LOC106579699 coding downstream 104191 6252982 ~ 6498275 (+)
LOC110535194 LOC106579701 coding downstream 148914 6297705 ~ 6320962 (+)
LOC110536537 LOC106579698 coding downstream 197216 6346007 ~ 6353351 (+)
LOC110536538 LOC106579687 coding downstream 230653 6379444 ~ 6480492 (+)
LOC110536540 NA coding downstream 510637 6659428 ~ 6675322 (+)
G937892 NA non-coding upstream 14402 6133449 ~ 6134025 (+)
G937889 NA non-coding upstream 26158 6121584 ~ 6122269 (+)
G937888 NA non-coding upstream 26893 6121004 ~ 6121534 (+)
G937849 NA non-coding upstream 35125 6109783 ~ 6113302 (+)
G937899 NA non-coding downstream 18313 6167104 ~ 6167691 (+)
G937923 NA non-coding downstream 72491 6221282 ~ 6222049 (+)
G937925 NA non-coding downstream 75988 6224779 ~ 6225211 (+)
G937930 NA non-coding downstream 86447 6235238 ~ 6236139 (+)
G937942 NA non-coding downstream 125275 6274066 ~ 6274616 (+)
G937237 NA other upstream 643098 5504704 ~ 5505329 (+)
G937096 xkr9 other upstream 1003862 5143317 ~ 5144565 (+)
G937051 NA other upstream 1120282 5019905 ~ 5028145 (+)
G935977 NA other upstream 2166229 3981851 ~ 3982198 (+)
G938723 NA other downstream 870360 7019151 ~ 7021424 (+)
G939408 NA other downstream 1425561 7574352 ~ 7574909 (+)
G939544 NA other downstream 1671729 7820520 ~ 7823317 (+)
G939690 NA other downstream 1991475 8140266 ~ 8140583 (+)
LOC110535212 LOC106579665 other downstream 2047577 8195607 ~ 8379328 (+)

Expression


Co-expression Network