G937899


Basic Information

Item Value
gene id G937899
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 6167104 ~ 6167691 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1069697
TGGATAAGTGGTTCATTAGCAGCTGCAGAAACTCTTATATATGCTTGGATAAGTGGTTCATTAGCAGCTGCAGAAACTCTTATATATGCTTGGATAAGTGGTTCATTAGCAGCTGCAGAAACTCTTATATATGTTTGGATAAGTGGCTCATTAGCAGCTGCAGAAACTCTTATATATGCTTGGATAAGTGGTTCATTAGCAGCTGCAGAAACTCTTATATATGCTTGGATAAGTGGTTCATTAGCAGCTGCAGAAAGTCGTATATATGCTTGGATAAGTGGCTCATTAGCAGCTGCAGAAACTCTTATATATGTTTGGAT

Function

NR:

description
uncharacterized protein LOC109906813

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1069697 True 320 lncRNA 0.38 2 6167104 6167691

Neighbor

gene id symbol gene type direction distance location
LOC110535188 LOC106579710 coding upstream 19021 6141715 ~ 6148083 (+)
LOC110535186 LOC106579708 coding upstream 27387 6127375 ~ 6139717 (+)
LOC110536599 LOC106579705 coding upstream 68706 6041842 ~ 6098398 (+)
LOC110535189 LOC106579706 coding upstream 128782 6028660 ~ 6038322 (+)
LOC110535182 prdm14 coding upstream 727745 5432326 ~ 5439359 (+)
LOC110535195 LOC106579699 coding downstream 85291 6252982 ~ 6498275 (+)
LOC110535194 LOC106579701 coding downstream 130014 6297705 ~ 6320962 (+)
LOC110536537 LOC106579698 coding downstream 178316 6346007 ~ 6353351 (+)
LOC110536538 LOC106579687 coding downstream 211753 6379444 ~ 6480492 (+)
LOC110536540 NA coding downstream 491737 6659428 ~ 6675322 (+)
G937851 NA non-coding upstream 18313 6148427 ~ 6148791 (+)
G937892 NA non-coding upstream 33079 6133449 ~ 6134025 (+)
G937889 NA non-coding upstream 44835 6121584 ~ 6122269 (+)
G937888 NA non-coding upstream 45570 6121004 ~ 6121534 (+)
G937849 NA non-coding upstream 53802 6109783 ~ 6113302 (+)
G937923 NA non-coding downstream 53591 6221282 ~ 6222049 (+)
G937925 NA non-coding downstream 57088 6224779 ~ 6225211 (+)
G937930 NA non-coding downstream 67547 6235238 ~ 6236139 (+)
G937942 NA non-coding downstream 106375 6274066 ~ 6274616 (+)
G937237 NA other upstream 661775 5504704 ~ 5505329 (+)
G937096 xkr9 other upstream 1022539 5143317 ~ 5144565 (+)
G937051 NA other upstream 1138959 5019905 ~ 5028145 (+)
G935977 NA other upstream 2184906 3981851 ~ 3982198 (+)
G938723 NA other downstream 851460 7019151 ~ 7021424 (+)
G939408 NA other downstream 1406661 7574352 ~ 7574909 (+)
G939544 NA other downstream 1652829 7820520 ~ 7823317 (+)
G939690 NA other downstream 1972575 8140266 ~ 8140583 (+)
LOC110535212 LOC106579665 other downstream 2028677 8195607 ~ 8379328 (+)

Expression


Co-expression Network