G938019


Basic Information

Item Value
gene id G938019
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 6455603 ~ 6456990 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1069852
tcagtcagtcattcagtcagtcagtcagtgagtcattcagtcagtcattcagtcagtcagtcagtcagtcattcagtcattcagtcagtcattcagtcattcagtcattcagtcagtcagtcagtcagtcagtcagtcattcagtcagtcagtcagtcagtcagtcagtcagtcattcagtcagtcagtcagtcagtaagtcagtcagtcagtcagtcagtcagtcagtcattcagtcagtcagtcattcagtcagtaagtcagtcattcagccagtcagtcagtcagtcagtgagtcattcagtcagtcagtcagtaagtcagtcagtcattcagtcagtcagtcattcagccagtcagtcagtcagtcagtgagtcattcagtcagtcagtcagtcagtaagtcagtcagtcagtcagtcagtcagtgagtaagtcagtcagtcattcagtcagtcattcagtcagtaagagtTCCGCTGAGGCTGAAGCAATGGAGTTGCCTTTAATTCCCAGGAACCTTCTCACCCTGAGTGTCTTCTTCTTCTAGCCCCGTCTAGGAAACtagcagggagaggggaaatGACTGGCGAATTGGTCTATCCTGGTCTGTCCTGCTGGAGATATGTGATTGATATCCACAAAAGGACCTTTTAAATCACTGGCCTAATAAACAATCGAATGGATCATTGTAACGTGCTTCACTAATGATTTCATTTGGGCActccaaaaaaaacaacatttcctCCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1069852 True 752 lncRNA 0.45 3 6455603 6456990

Neighbor

gene id symbol gene type direction distance location
LOC110536537 LOC106579698 coding upstream 102252 6346007 ~ 6353351 (+)
LOC110535194 LOC106579701 coding upstream 134641 6297705 ~ 6320962 (+)
LOC110535195 LOC106579699 coding upstream 170896 6252982 ~ 6498275 (+)
LOC110535188 LOC106579710 coding upstream 307520 6141715 ~ 6148083 (+)
LOC110535186 LOC106579708 coding upstream 315886 6127375 ~ 6139717 (+)
LOC110536540 NA coding downstream 202438 6659428 ~ 6675322 (+)
LOC110535201 LOC106579689 coding downstream 555358 7012348 ~ 7051408 (+)
LOC110535202 LOC106579690 coding downstream 913853 7370843 ~ 7427263 (+)
LOC110535203 LOC106579691 coding downstream 990424 7447414 ~ 7502456 (+)
LOC110536543 LOC106579684 coding downstream 1506019 7963009 ~ 7969001 (+)
G937986 NA non-coding upstream 16754 6438172 ~ 6438849 (+)
G938008 NA non-coding upstream 25750 6428330 ~ 6429853 (+)
G937998 NA non-coding upstream 54933 6399415 ~ 6400670 (+)
G937993 NA non-coding upstream 63811 6391522 ~ 6391792 (+)
G937975 NA non-coding upstream 95310 6359418 ~ 6360293 (+)
G938024 NA non-coding downstream 23692 6480682 ~ 6481701 (+)
G938025 NA non-coding downstream 25275 6482265 ~ 6485664 (+)
G938038 NA non-coding downstream 45699 6502689 ~ 6504091 (+)
G938045 NA non-coding downstream 57241 6514231 ~ 6514587 (+)
G938069 NA non-coding downstream 91141 6548131 ~ 6548763 (+)
G937889 NA other upstream 333334 6121584 ~ 6122269 (+)
G937237 NA other upstream 950274 5504704 ~ 5505329 (+)
G937096 xkr9 other upstream 1311038 5143317 ~ 5144565 (+)
G937051 NA other upstream 1427458 5019905 ~ 5028145 (+)
G935977 NA other upstream 2473405 3981851 ~ 3982198 (+)
G938723 NA other downstream 562161 7019151 ~ 7021424 (+)
G939408 NA other downstream 1117362 7574352 ~ 7574909 (+)
G939544 NA other downstream 1363530 7820520 ~ 7823317 (+)
G939690 NA other downstream 1683276 8140266 ~ 8140583 (+)
LOC110535212 LOC106579665 other downstream 1739378 8195607 ~ 8379328 (+)

Expression


Co-expression Network