Gene
RNA
| Item | Value |
|---|---|
| gene id | G938277 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 6465913 ~ 6466685 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1070195 | False | 290 | TUCP | 0.49 | 2 | 6465913 | 6466685 |
| TU1070194 | True | 269 | lncRNA | 0.42 | 2 | 6466347 | 6466685 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535196 | LOC106590296 | coding | downstream | 125574 | 6334971 ~ 6340773 (-) |
| LOC110536536 | LOC106579692 | coding | downstream | 132275 | 6331684 ~ 6334072 (-) |
| LOC110535193 | LOC106579700 | coding | downstream | 167978 | 6289427 ~ 6298369 (-) |
| LOC110536535 | LOC106579709 | coding | downstream | 204683 | 6148160 ~ 6261664 (-) |
| LOC110535187 | LOC106579707 | coding | downstream | 344783 | 6113500 ~ 6121564 (-) |
| LOC110535197 | LOC106579695 | coding | upstream | 32354 | 6499039 ~ 6504541 (-) |
| LOC110536539 | LOC106579688 | coding | upstream | 43375 | 6510060 ~ 6586818 (-) |
| LOC110535204 | tgfr1 | coding | upstream | 1144276 | 7610961 ~ 7689317 (-) |
| LOC110535206 | LOC106579676 | coding | upstream | 1239405 | 7706090 ~ 7797711 (-) |
| LOC110536542 | LOC106579677 | coding | upstream | 1350649 | 7815839 ~ 7923511 (-) |
| G938259 | NA | non-coding | downstream | 37089 | 6428597 ~ 6429258 (-) |
| G938240 | NA | non-coding | downstream | 67143 | 6398657 ~ 6399204 (-) |
| G938239 | NA | non-coding | downstream | 68011 | 6397547 ~ 6398336 (-) |
| G938233 | NA | non-coding | downstream | 74584 | 6391303 ~ 6391763 (-) |
| G938232 | NA | non-coding | downstream | 77558 | 6387520 ~ 6388789 (-) |
| G938292 | NA | non-coding | upstream | 28612 | 6495297 ~ 6496246 (-) |
| G938329 | NA | non-coding | upstream | 113195 | 6579880 ~ 6582691 (-) |
| G938333 | NA | non-coding | upstream | 122854 | 6589539 ~ 6590342 (-) |
| G938334 | NA | non-coding | upstream | 125175 | 6591860 ~ 6592098 (-) |
| G938346 | NA | non-coding | upstream | 134028 | 6600713 ~ 6601404 (-) |
| G938130 | NA | other | downstream | 366115 | 6099390 ~ 6100232 (-) |
| LOC110536541 | LOC106590236 | other | downstream | 649248 | 5745494 ~ 5912106 (-) |
| G937256 | NA | other | downstream | 1423648 | 5041827 ~ 5042699 (-) |
| G936486 | NA | other | downstream | 2397598 | 4065516 ~ 4068749 (-) |
| LOC110536524 | rdh10 | other | downstream | 2466098 | 3994738 ~ 4015695 (-) |
| G938331 | NA | other | upstream | 121758 | 6588443 ~ 6588817 (-) |
| G938351 | NA | other | upstream | 138500 | 6605185 ~ 6607755 (-) |
| G940894 | LOC106579620 | other | upstream | 2426329 | 8893014 ~ 8925621 (-) |
| LOC118937306 | NA | other | upstream | 2529286 | 8995971 ~ 8996594 (-) |
