G938732


Basic Information

Item Value
gene id G938732
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 7031658 ~ 7035460 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1070692
gtgcatgttcattcattgtttatggttcattgaacaagcattggaaacagtttataaaccctttacaatgaagatctgtgaagttatttctaTTTTtgcaaattatctttgaaagacagggtcctgaaaatgggACGTTAatctttttgctgagtttatatgtagATATGCCCCACTCATTGGTTGGCTTTACATGAAACAAAACAGTGTAAGTGACAGGATATAGCgtgtgtgtaacggttttcttgagtcgaaggagaggcggaccaaagtgcagcgtggtttctattcatggttgTTTAATCAAGAAACTATACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1070692 True 318 lncRNA 0.37 2 7031658 7035460

Neighbor

gene id symbol gene type direction distance location
LOC110536540 NA coding upstream 356336 6659428 ~ 6675322 (+)
LOC110536538 LOC106579687 coding upstream 551166 6379444 ~ 6480492 (+)
LOC110536537 LOC106579698 coding upstream 678307 6346007 ~ 6353351 (+)
LOC110535194 LOC106579701 coding upstream 710696 6297705 ~ 6320962 (+)
LOC110535195 LOC106579699 coding upstream 746951 6252982 ~ 6498275 (+)
LOC110535202 LOC106579690 coding downstream 335383 7370843 ~ 7427263 (+)
LOC110535203 LOC106579691 coding downstream 411954 7447414 ~ 7502456 (+)
LOC110536543 LOC106579684 coding downstream 927549 7963009 ~ 7969001 (+)
LOC110535207 LOC106579684 coding downstream 934467 7969927 ~ 7971811 (+)
LOC110536601 NA coding downstream 1136412 8171872 ~ 8174025 (+)
G938694 NA non-coding upstream 47085 6979554 ~ 6984573 (+)
G938531 NA non-coding upstream 258153 6772070 ~ 6773505 (+)
G938516 NA non-coding upstream 268754 6762704 ~ 6762904 (+)
G938366 NA non-coding upstream 362295 6622795 ~ 6669363 (+)
G938358 NA non-coding upstream 413871 6614100 ~ 6617787 (+)
LOC110535201 LOC106579689 non-coding downstream 15272 7012348 ~ 7051408 (+)
G938889 NA non-coding downstream 27773 7063233 ~ 7063485 (+)
G938915 NA non-coding downstream 46683 7082143 ~ 7082544 (+)
G938925 NA non-coding downstream 56554 7092014 ~ 7092241 (+)
G938926 NA non-coding downstream 57078 7092538 ~ 7092759 (+)
G938723 NA other upstream 10234 7019151 ~ 7021424 (+)
G937889 NA other upstream 909389 6121584 ~ 6122269 (+)
G937237 NA other upstream 1526329 5504704 ~ 5505329 (+)
G937096 xkr9 other upstream 1887093 5143317 ~ 5144565 (+)
G937051 NA other upstream 2003513 5019905 ~ 5028145 (+)
G939408 NA other downstream 538892 7574352 ~ 7574909 (+)
G939544 NA other downstream 785060 7820520 ~ 7823317 (+)
G939690 NA other downstream 1104806 8140266 ~ 8140583 (+)
LOC110535212 LOC106579665 other downstream 1160908 8195607 ~ 8379328 (+)
G940102 NA other downstream 1339046 8374506 ~ 8377928 (+)

Expression


Co-expression Network