G938939


Basic Information

Item Value
gene id G938939
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 7100205 ~ 7100463 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1070908
attccctgtcttcggtcagttaggcttgccacttttttttaagaatgtgaaatgtcagaataatagtagagcgaattatttatttcagcttttatttctttcatcacattcccattggctcagaagtttacatacactcaattagtatttggtaacattgcctttaaattgtttaacttgggtcaaatgtttcagatagccttccacaagcttcccacaataagttgggtgaattttggcccattcctcctgacagagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1070908 True 259 lncRNA 0.37 1 7100205 7100463

Neighbor

gene id symbol gene type direction distance location
LOC110535201 LOC106579689 coding upstream 48801 7012348 ~ 7051408 (+)
LOC110536540 NA coding upstream 424883 6659428 ~ 6675322 (+)
LOC110536538 LOC106579687 coding upstream 619713 6379444 ~ 6480492 (+)
LOC110536537 LOC106579698 coding upstream 746854 6346007 ~ 6353351 (+)
LOC110535194 LOC106579701 coding upstream 779243 6297705 ~ 6320962 (+)
LOC110535202 LOC106579690 coding downstream 270380 7370843 ~ 7427263 (+)
LOC110535203 LOC106579691 coding downstream 346951 7447414 ~ 7502456 (+)
LOC110536543 LOC106579684 coding downstream 862546 7963009 ~ 7969001 (+)
LOC110535207 LOC106579684 coding downstream 869464 7969927 ~ 7971811 (+)
LOC110536601 NA coding downstream 1071409 8171872 ~ 8174025 (+)
G938929 NA non-coding upstream 4887 7095102 ~ 7095318 (+)
G938926 NA non-coding upstream 7446 7092538 ~ 7092759 (+)
G938925 NA non-coding upstream 7964 7092014 ~ 7092241 (+)
G938915 NA non-coding upstream 17661 7082143 ~ 7082544 (+)
G938889 NA non-coding upstream 36720 7063233 ~ 7063485 (+)
G938945 NA non-coding downstream 2885 7103348 ~ 7103668 (+)
G938979 NA non-coding downstream 23131 7123594 ~ 7123995 (+)
G938983 NA non-coding downstream 28237 7128700 ~ 7128922 (+)
G939063 NA non-coding downstream 111021 7211484 ~ 7211756 (+)
G939134 NA non-coding downstream 185927 7286390 ~ 7287259 (+)
G938723 NA other upstream 78781 7019151 ~ 7021424 (+)
G937889 NA other upstream 977936 6121584 ~ 6122269 (+)
G937237 NA other upstream 1594876 5504704 ~ 5505329 (+)
G937096 xkr9 other upstream 1955640 5143317 ~ 5144565 (+)
G937051 NA other upstream 2072060 5019905 ~ 5028145 (+)
G939408 NA other downstream 473889 7574352 ~ 7574909 (+)
G939544 NA other downstream 720057 7820520 ~ 7823317 (+)
G939690 NA other downstream 1039803 8140266 ~ 8140583 (+)
LOC110535212 LOC106579665 other downstream 1095905 8195607 ~ 8379328 (+)
G940102 NA other downstream 1274043 8374506 ~ 8377928 (+)

Expression


Co-expression Network