G938945


Basic Information

Item Value
gene id G938945
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 7103348 ~ 7103668 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1070914
gcatatggtctcacaaggggtctgaggatctcatctcggtacctaatggcagtcaggctacctctggcgagcacatggagtgctgtgcggccccccaaagaaatgccaccccacaccatgactgacccaccgccaaaccggtcatgctggaagatgttgcaagcagcagaacgttctccacggcgtctccagactctgtcacgtctgtcacttTCATctatgaagagcacagggtgccagtggcgaatttgccaatcttggtgttctctggcaaatgccaaacgtcctgcacggtgttgggctgtaagcacaacccccacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1070914 True 321 lncRNA 0.56 1 7103348 7103668

Neighbor

gene id symbol gene type direction distance location
LOC110535201 LOC106579689 coding upstream 51944 7012348 ~ 7051408 (+)
LOC110536540 NA coding upstream 428026 6659428 ~ 6675322 (+)
LOC110536538 LOC106579687 coding upstream 622856 6379444 ~ 6480492 (+)
LOC110536537 LOC106579698 coding upstream 749997 6346007 ~ 6353351 (+)
LOC110535194 LOC106579701 coding upstream 782386 6297705 ~ 6320962 (+)
LOC110535202 LOC106579690 coding downstream 267175 7370843 ~ 7427263 (+)
LOC110535203 LOC106579691 coding downstream 343746 7447414 ~ 7502456 (+)
LOC110536543 LOC106579684 coding downstream 859341 7963009 ~ 7969001 (+)
LOC110535207 LOC106579684 coding downstream 866259 7969927 ~ 7971811 (+)
LOC110536601 NA coding downstream 1068204 8171872 ~ 8174025 (+)
G938939 NA non-coding upstream 2885 7100205 ~ 7100463 (+)
G938929 NA non-coding upstream 8030 7095102 ~ 7095318 (+)
G938926 NA non-coding upstream 10589 7092538 ~ 7092759 (+)
G938925 NA non-coding upstream 11107 7092014 ~ 7092241 (+)
G938915 NA non-coding upstream 20804 7082143 ~ 7082544 (+)
G938979 NA non-coding downstream 19926 7123594 ~ 7123995 (+)
G938983 NA non-coding downstream 25032 7128700 ~ 7128922 (+)
G939063 NA non-coding downstream 107816 7211484 ~ 7211756 (+)
G939134 NA non-coding downstream 182722 7286390 ~ 7287259 (+)
G939177 NA non-coding downstream 220677 7324345 ~ 7325191 (+)
G938723 NA other upstream 81924 7019151 ~ 7021424 (+)
G937889 NA other upstream 981079 6121584 ~ 6122269 (+)
G937237 NA other upstream 1598019 5504704 ~ 5505329 (+)
G937096 xkr9 other upstream 1958783 5143317 ~ 5144565 (+)
G937051 NA other upstream 2075203 5019905 ~ 5028145 (+)
G939408 NA other downstream 470684 7574352 ~ 7574909 (+)
G939544 NA other downstream 716852 7820520 ~ 7823317 (+)
G939690 NA other downstream 1036598 8140266 ~ 8140583 (+)
LOC110535212 LOC106579665 other downstream 1092700 8195607 ~ 8379328 (+)
G940102 NA other downstream 1270838 8374506 ~ 8377928 (+)

Expression


Co-expression Network