G938979


Basic Information

Item Value
gene id G938979
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 7123594 ~ 7123995 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1070948
GATGAAGACCAAGATAGTCAGTGACTagttaacaccagacacagatgaagacctagatagtcagtaactagctaacaccaggcacagatgaagacctagataGTCaggaactagctaacaccagatacagatgaagacctagctagtcaGTGACTagttaacaccagacacagatgaagacctagataGTCAGTGACTagttaacaccagacacagatgaagacatAGATAGTCaggaactagctaacaccaggcacagatgaagacctagctagtcaggaactagctaacaccaggcacagatgaagacctagctagtcaggaactagctaacaccagatacagatgaagacctagctagtcaGTGACTagttaacaccagacacagatgaagacctagat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1070948 True 402 lncRNA 0.44 1 7123594 7123995

Neighbor

gene id symbol gene type direction distance location
LOC110535201 LOC106579689 coding upstream 72190 7012348 ~ 7051408 (+)
LOC110536540 NA coding upstream 448272 6659428 ~ 6675322 (+)
LOC110536538 LOC106579687 coding upstream 643102 6379444 ~ 6480492 (+)
LOC110536537 LOC106579698 coding upstream 770243 6346007 ~ 6353351 (+)
LOC110535194 LOC106579701 coding upstream 802632 6297705 ~ 6320962 (+)
LOC110535202 LOC106579690 coding downstream 246848 7370843 ~ 7427263 (+)
LOC110535203 LOC106579691 coding downstream 323419 7447414 ~ 7502456 (+)
LOC110536543 LOC106579684 coding downstream 839014 7963009 ~ 7969001 (+)
LOC110535207 LOC106579684 coding downstream 845932 7969927 ~ 7971811 (+)
LOC110536601 NA coding downstream 1047877 8171872 ~ 8174025 (+)
G938945 NA non-coding upstream 19926 7103348 ~ 7103668 (+)
G938939 NA non-coding upstream 23131 7100205 ~ 7100463 (+)
G938929 NA non-coding upstream 28276 7095102 ~ 7095318 (+)
G938926 NA non-coding upstream 30835 7092538 ~ 7092759 (+)
G938925 NA non-coding upstream 31353 7092014 ~ 7092241 (+)
G938983 NA non-coding downstream 4705 7128700 ~ 7128922 (+)
G939063 NA non-coding downstream 87489 7211484 ~ 7211756 (+)
G939134 NA non-coding downstream 162395 7286390 ~ 7287259 (+)
G939177 NA non-coding downstream 200350 7324345 ~ 7325191 (+)
G939179 NA non-coding downstream 201484 7325479 ~ 7327105 (+)
G938723 NA other upstream 102170 7019151 ~ 7021424 (+)
G937889 NA other upstream 1001325 6121584 ~ 6122269 (+)
G937237 NA other upstream 1618265 5504704 ~ 5505329 (+)
G937096 xkr9 other upstream 1979029 5143317 ~ 5144565 (+)
G937051 NA other upstream 2095449 5019905 ~ 5028145 (+)
G939408 NA other downstream 450357 7574352 ~ 7574909 (+)
G939544 NA other downstream 696525 7820520 ~ 7823317 (+)
G939690 NA other downstream 1016271 8140266 ~ 8140583 (+)
LOC110535212 LOC106579665 other downstream 1072373 8195607 ~ 8379328 (+)
G940102 NA other downstream 1250511 8374506 ~ 8377928 (+)

Expression


Co-expression Network