G939177


Basic Information

Item Value
gene id G939177
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 7324345 ~ 7325191 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1071158
gtgttctatactatctatttattgcatcttagcctatgcagctctgacattgctcatacACATATTTATAGATTCttattccttacttagatttgtgtgtatcaggtatttgttgtggaattgttagatattacatgttagatattgcctgactttcagaactagaagcacaagcatttcgctacactcgcaataacatctgctaacattgtgtatgtgaccaataacatctgctaacaatgtgtatgtgaccaataacatctgctaacattgtgtatgtgaccaataacatctgctaacattgtgtatgtgaccaataacatctgctaaccatgtgtatgtgaccaataacatctgctaacattgtgtatgtgaccaataacatctgctaaccatgtgtatgtgaccaataacatctgctaacattgtgtatgtgaccaataacatctgctaacattgtgtatgtgaccaataacatctgctaacattgtgtatgtgaccaataacatctgctaacattgtgtatgtgaccaataacatctgctaacattgtgtatgtgaccaataacatctgctaacattgtgtatgtgaccaataacatctgctaacattgtgtatgtgaccaataacatctgctaacattgtgtatgtgaccaataacatctgctaacattgtgtatgtgaccaataacatctgctaaccatgtgtatgtgaccaataacatctgctaacattgtgtatgtgaccaataacatctgctaacattgtgtatgtgaccaataacatctgctaacattgtgtatgtgaccaataacatctgctaacattgtgtatgtgaccaataa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1071158 True 847 lncRNA 0.35 1 7324345 7325191

Neighbor

gene id symbol gene type direction distance location
LOC110535201 LOC106579689 coding upstream 272941 7012348 ~ 7051408 (+)
LOC110536540 NA coding upstream 649023 6659428 ~ 6675322 (+)
LOC110536538 LOC106579687 coding upstream 843853 6379444 ~ 6480492 (+)
LOC110536537 LOC106579698 coding upstream 970994 6346007 ~ 6353351 (+)
LOC110535194 LOC106579701 coding upstream 1003383 6297705 ~ 6320962 (+)
LOC110535202 LOC106579690 coding downstream 45652 7370843 ~ 7427263 (+)
LOC110535203 LOC106579691 coding downstream 122223 7447414 ~ 7502456 (+)
LOC110536543 LOC106579684 coding downstream 637818 7963009 ~ 7969001 (+)
LOC110535207 LOC106579684 coding downstream 644736 7969927 ~ 7971811 (+)
LOC110536601 NA coding downstream 846681 8171872 ~ 8174025 (+)
G939134 NA non-coding upstream 37086 7286390 ~ 7287259 (+)
G939063 NA non-coding upstream 112589 7211484 ~ 7211756 (+)
G938983 NA non-coding upstream 195423 7128700 ~ 7128922 (+)
G938979 NA non-coding upstream 200350 7123594 ~ 7123995 (+)
G938945 NA non-coding upstream 220677 7103348 ~ 7103668 (+)
G939179 NA non-coding downstream 288 7325479 ~ 7327105 (+)
G939235 NA non-coding downstream 111496 7436687 ~ 7436886 (+)
G939238 NA non-coding downstream 114730 7439921 ~ 7440202 (+)
G939384 NA non-coding downstream 225492 7550683 ~ 7550929 (+)
G939387 NA non-coding downstream 226793 7551984 ~ 7552248 (+)
G938723 NA other upstream 302921 7019151 ~ 7021424 (+)
G937889 NA other upstream 1202076 6121584 ~ 6122269 (+)
G937237 NA other upstream 1819016 5504704 ~ 5505329 (+)
G937096 xkr9 other upstream 2179780 5143317 ~ 5144565 (+)
G937051 NA other upstream 2296200 5019905 ~ 5028145 (+)
G939408 NA other downstream 249161 7574352 ~ 7574909 (+)
G939544 NA other downstream 495329 7820520 ~ 7823317 (+)
G939690 NA other downstream 815075 8140266 ~ 8140583 (+)
LOC110535212 LOC106579665 other downstream 871177 8195607 ~ 8379328 (+)
G940102 NA other downstream 1049315 8374506 ~ 8377928 (+)

Expression


Co-expression Network