G939453


Basic Information

Item Value
gene id G939453
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 7656218 ~ 7656420 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1071477
gtcctataataactacaacctaaaacgtcctacctgggaatattgaagacccatgttaaaaggaaccaccaactttcatatgttctcatgttctgagcaaggaacttaaacgttagctttttttacatggcacatattgcacttttactttcttctccaacactgtgtttttgccaaatttaaaccaaattgaacatgtttca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1071477 True 203 lncRNA 0.35 1 7656218 7656420

Neighbor

gene id symbol gene type direction distance location
LOC110535203 LOC106579691 coding upstream 153762 7447414 ~ 7502456 (+)
LOC110535202 LOC106579690 coding upstream 228955 7370843 ~ 7427263 (+)
LOC110535201 LOC106579689 coding upstream 604814 7012348 ~ 7051408 (+)
LOC110536540 NA coding upstream 980896 6659428 ~ 6675322 (+)
LOC110536538 LOC106579687 coding upstream 1175726 6379444 ~ 6480492 (+)
LOC110536543 LOC106579684 coding downstream 306589 7963009 ~ 7969001 (+)
LOC110535207 LOC106579684 coding downstream 313507 7969927 ~ 7971811 (+)
LOC110536601 NA coding downstream 515452 8171872 ~ 8174025 (+)
LOC118937436 NA coding downstream 518373 8174793 ~ 8175785 (+)
LOC110535212 LOC106579665 coding downstream 539187 8195607 ~ 8379328 (+)
G939452 NA non-coding upstream 1810 7654037 ~ 7654408 (+)
G939451 LOC106579675 non-coding upstream 2591 7653390 ~ 7653627 (+)
G939449 NA non-coding upstream 4661 7651348 ~ 7651557 (+)
G939387 NA non-coding upstream 103970 7551984 ~ 7552248 (+)
G939384 NA non-coding upstream 105289 7550683 ~ 7550929 (+)
G939454 NA non-coding downstream 557 7656977 ~ 7657179 (+)
G939457 NA non-coding downstream 4895 7661315 ~ 7661542 (+)
G939459 NA non-coding downstream 10264 7666684 ~ 7666950 (+)
G939463 NA non-coding downstream 16709 7673129 ~ 7673333 (+)
G939464 NA non-coding downstream 17038 7673458 ~ 7673695 (+)
G939408 NA other upstream 81309 7574352 ~ 7574909 (+)
G938723 NA other upstream 634794 7019151 ~ 7021424 (+)
G937889 NA other upstream 1533949 6121584 ~ 6122269 (+)
G937237 NA other upstream 2150889 5504704 ~ 5505329 (+)
G937096 xkr9 other upstream 2511653 5143317 ~ 5144565 (+)
G939544 NA other downstream 164100 7820520 ~ 7823317 (+)
G939690 NA other downstream 483846 8140266 ~ 8140583 (+)
G940102 NA other downstream 718086 8374506 ~ 8377928 (+)
LOC110536544 LOC106590277 other downstream 723427 8379847 ~ 8497020 (+)

Expression


Co-expression Network