G939476



Basic Information


Item Value
gene id G939476
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 7688253 ~ 7688552 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1071500
TTACTATCTAGGGGGTGTCCGAGTAACCTCTGAGCCACAATGTTACCAGCAATCCGTGTGTCAAGGCAATATTGGCTATTTTGAAAATCACCACGAGTGAGATGCAACATTTCGTTTAATTTGTCTTGCCAGTTCAGCTCCCAGTGAAGCTCGCACAATGAGTATGACTTTGAACATCCCCTCAAGATCagtcactagctaacgttagttttgCCGTTTAACTTTTGTCAACGGCGTTAAAACCTTGTTTTACAACAAGCAAAAAGCATGAGTGACGAGCAACCGCATACtgtagcaaca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1071500 True 300 lncRNA 0.43 1 7688253 7688552
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110535203 LOC106579691 coding upstream 185797 7447414 ~ 7502456 (+)
LOC110535202 LOC106579690 coding upstream 260990 7370843 ~ 7427263 (+)
LOC110535201 LOC106579689 coding upstream 636849 7012348 ~ 7051408 (+)
LOC110536540 NA coding upstream 1012931 6659428 ~ 6675322 (+)
LOC110536538 LOC106579687 coding upstream 1207761 6379444 ~ 6480492 (+)
LOC110536543 LOC106579684 coding downstream 274457 7963009 ~ 7969001 (+)
LOC110535207 LOC106579684 coding downstream 281375 7969927 ~ 7971811 (+)
LOC110536601 NA coding downstream 483320 8171872 ~ 8174025 (+)
LOC118937436 NA coding downstream 486241 8174793 ~ 8175785 (+)
LOC110535212 LOC106579665 coding downstream 507055 8195607 ~ 8379328 (+)
G939472 NA non-coding upstream 4403 7683632 ~ 7683850 (+)
G939464 NA non-coding upstream 14558 7673458 ~ 7673695 (+)
G939463 NA non-coding upstream 14920 7673129 ~ 7673333 (+)
G939459 NA non-coding upstream 21303 7666684 ~ 7666950 (+)
G939457 NA non-coding upstream 26711 7661315 ~ 7661542 (+)
G939477 NA non-coding downstream 269 7688821 ~ 7689108 (+)
G939478 NA non-coding downstream 1299 7689851 ~ 7690206 (+)
G939479 NA non-coding downstream 1949 7690501 ~ 7691830 (+)
G939487 NA non-coding downstream 16332 7704884 ~ 7706739 (+)
G939493 NA non-coding downstream 30755 7719307 ~ 7720088 (+)
G939408 NA other upstream 113344 7574352 ~ 7574909 (+)
G938723 NA other upstream 666829 7019151 ~ 7021424 (+)
G937889 NA other upstream 1565984 6121584 ~ 6122269 (+)
G937237 NA other upstream 2182924 5504704 ~ 5505329 (+)
G937096 xkr9 other upstream 2543688 5143317 ~ 5144565 (+)
G939544 NA other downstream 131968 7820520 ~ 7823317 (+)
G939690 NA other downstream 451714 8140266 ~ 8140583 (+)
G940102 NA other downstream 685954 8374506 ~ 8377928 (+)
LOC110536544 LOC106590277 other downstream 691295 8379847 ~ 8497020 (+)

Expression


G939476 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
End of interactive chart.

G939476 Expression in each Bioproject

Bar chart with 9 bars.
G939476 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 10.
End of interactive chart.

Co-expression Network