G939493


Basic Information

Item Value
gene id G939493
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 7719307 ~ 7720088 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1071521
CATCCGTGTACAATACTATTATTTTCAATGTAGCGTGGAGCCTTTGCTTTGAGTTGAGCGCCGAATGACTGTAAAGTAGTGTACCCAACTGTGTATTATTCTCACTGCAGACATCAACAGGTTACTATAGAGactgatgataggatgacatcAACAGGTTACTATAGAGACtctgatgataggatgacatcAACAGGTTACTATAGAGACtctgatgataggatgacatcAACAGGTTACTATAGAGACtctgatgataggatgacatcAACAGGTTACTATAGAGACtctgatgataggatgacatcAACAGGTTACTATAGAGACTCTGATGTTTAGGGAGTGTGTCCTTATTAACAATGTGTGTTTAGGGAGTGTGTCCTTATTAACAATGTGTGTTTAGGGAGTGTGTCCTTATTAACAATGTGTGTTTAGGG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106563894 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1071521 True 437 lncRNA 0.39 3 7719307 7720088

Neighbor

gene id symbol gene type direction distance location
LOC110535203 LOC106579691 coding upstream 216851 7447414 ~ 7502456 (+)
LOC110535202 LOC106579690 coding upstream 292044 7370843 ~ 7427263 (+)
LOC110535201 LOC106579689 coding upstream 667903 7012348 ~ 7051408 (+)
LOC110536540 NA coding upstream 1043985 6659428 ~ 6675322 (+)
LOC110536538 LOC106579687 coding upstream 1238815 6379444 ~ 6480492 (+)
LOC110536543 LOC106579684 coding downstream 242921 7963009 ~ 7969001 (+)
LOC110535207 LOC106579684 coding downstream 249839 7969927 ~ 7971811 (+)
LOC110536601 NA coding downstream 451784 8171872 ~ 8174025 (+)
LOC118937436 NA coding downstream 454705 8174793 ~ 8175785 (+)
LOC110535212 LOC106579665 coding downstream 475519 8195607 ~ 8379328 (+)
G939487 NA non-coding upstream 12568 7704884 ~ 7706739 (+)
G939479 NA non-coding upstream 27477 7690501 ~ 7691830 (+)
G939478 NA non-coding upstream 29101 7689851 ~ 7690206 (+)
G939477 NA non-coding upstream 30199 7688821 ~ 7689108 (+)
G939476 NA non-coding upstream 30755 7688253 ~ 7688552 (+)
G939510 NA non-coding downstream 36861 7756949 ~ 7759263 (+)
G939518 NA non-coding downstream 54827 7774915 ~ 7790418 (+)
G939535 NA non-coding downstream 88360 7808448 ~ 7810033 (+)
G939542 NA non-coding downstream 95701 7815789 ~ 7818889 (+)
G939580 NA non-coding downstream 193883 7913971 ~ 7914317 (+)
G939408 NA other upstream 144398 7574352 ~ 7574909 (+)
G938723 NA other upstream 697883 7019151 ~ 7021424 (+)
G937889 NA other upstream 1597038 6121584 ~ 6122269 (+)
G937237 NA other upstream 2213978 5504704 ~ 5505329 (+)
G937096 xkr9 other upstream 2574742 5143317 ~ 5144565 (+)
G939544 NA other downstream 100432 7820520 ~ 7823317 (+)
G939690 NA other downstream 420178 8140266 ~ 8140583 (+)
G940102 NA other downstream 654418 8374506 ~ 8377928 (+)
LOC110536544 LOC106590277 other downstream 659759 8379847 ~ 8497020 (+)

Expression


Co-expression Network