XLOC_028563 (si:dkey-21h14.12)



Basic Information


Item Value
gene id XLOC_028563
gene name si:dkey-21h14.12
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 11070864 ~ 11077872 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00055410
ATTTTCCGACTGTGAGGTTGGTTGGTGGTCATAGTGCCTGTGCTGGTCGAGTGGAGGTTTATCATGATGGTCAGTGGGGCACAGTGTGTGATTATGGCTGGGATATGACTGATGCTGCAGTGGTTTGTAGAGAACTGAAGTGTGGAGAGGCTGTAGATGCTCTGGGTGAAGCTGTATTTGGAAAAGGAACAGGTCAAATTTGGATGGATGATGTGGCCTGTGGTGGATTAGAGTCAACAGTGAAGAGCTGTAGTTCAGGAGGATGGGGTGAACATGACTGTGGTCATAGTGAAGATGCTGGGGTTATCTGCTTAGaAGTCAGGCTGGTTGGAGGTTCTCGCTGCTCTGGGAGGTTGGAGATCCTTCATAATCAGACATGGATGTCAGTGTGTGATGCTGCCTTTGACCAGCAGGATGCAGAGGTTGTGTGTAGAGAGCTGGACTGTGGGGCTCCTGTACAGGTGCTGAGAGCTGCTGCTTTTGACAAAGGAGACGCTCAGATGTGGACACAAGAGATTCACTGCAGAGGAGACGAGTCTCATATTGGATTATGTTCAACCACAAATGACACACAGTGCTCTCAAAAAAACTATGTAGAATTAAAATGTTCAGATTTTGAACTGGTCAGGTTGGTTGATGGTGACAGTTCCTGCAGTGGTCGAGTGGAGGTTTATCATAGAGGTCAGTGGGGAACAGTGTGTGGTGATTACTGGGATATGACTGATGCTGCAGTGGTGTGTAGAGAACTGGGCTGTGGAGAACCTCTAGAAGCTGTGCGTTCTGCTTACTTTAGACAAGGTTCAGGTGAAATCTGGATGGATGATGTTTCCTGTAGTGGATCAGAGTCAACACTGAAGAGCTGTAGTTCAAGAGGATGGGGTGAACATGACTGTGGTCTTTTTAATGATGCTGGAGTCAGATGCTCAGAAACCATAAATTATGGACGATTTACGAGACTTGCTGATGGACCTCACCTGTGCTCTGGGAGATTAGAAGTCCTTCGTGGAAACACCTGGTACACAGTGTGTGACGCTGCCTTTGACCAGCAGGATGCAGAGGTTGTGTGTAGAGAGCTGGACTGTGGGGCTCCTGTACAGGTGCTGAGAGCTGCTGCTTTTGACAAAGGAGACGCTCAGATGTGGACACAAGAGATTCACTGCAGAGGAAATGAGTCAATTATTCGACACTGTCCAACATCAGGACTACTTAAAATGAACTGCACCAATGTCAGTGATGTTGCACTGATGTGTTCTGGTTACACTGATGTCCGACTGCTCAATGGTCCTGACTCCTGTTCTGGTCGAGTTGAACGTCAGTATCTCAGTGAATGGGGCACAGTGTgtgatgcatgctgggatatgagAGCTGCCAGTGTCCTCTGTAAACAGCTGAATTGTGGGATTGCTGTGTCTGTTGTGGGATCAGACTGGTTTGGAGAGGAAAGTGGTGAAATCTGGGCTGATGTGTTTGATTGTGACGGGAATGAAACAAAACTCTCCGAATGTTCAATCTCTTCATGGAGTCGAGCTGAACGCTCTCATAGACGAGATGTTGGAGTCATCTGCTCTAACTCGTCTCTGGCTCTTCATGAGGGTCTGGTGCGGTTGTCTGGAGAGAGACAGTGTGAGGGGCAGGTGGAAGTTTTGATCCAGCAGGTCTGGAGGAAGGTTCTGCTGGACTCCTGGAGTCTCACTGAATCCTCTGTGGTCTGCAGACAGCTGGGCTGTGGCTCTGTGCTCAACTTCTCCGGCTCCTCTTTATCCAGTCCTGAACACAGTCATGAGTGTGTGATGGGCTTCCAGTGCTCTGGGAGTGAAGCTCATCTGGGGAACTGCAGCTCTCCACAAACTCTCAACTGCAGCTCCACACAACAGCTGTCAATCACCTGCCTTGGCCGCGGGTCCATCAGGCTGGTGGGTTCTGGGGGAGACTGTGCAGGGAGGCTGGAGGTTTTTCACAGCGGCTCATGGGGGACAGTGTGTGACGACTCCTGGGATATTAAAGATGCCCATGTGGTGTGCAGACAGCTGCAGTGTGGAGTGGCCCTCAGTAACCAGCAGGTACCAGCCTGGTTTGGTCCTGGTTCTGGACCCATATGGCTGGATGAGGTGGAGTGTAAGGGGAATGAGACGTCCCTGTGGAGCTGCTCTTCTCCAGGCTGGGGAAAACATGACTGTCAACACAAGGAGGATGTAGGAGTCGTCTGCTCTGAGTTTAAAGAGATCAGGTTAACTGAGGGCTGTGAAGGGAATGTGGAGGTTTTCTATAACGGATCCTGGGGAAATGTGTGTTACAACAAGATGGACAGAGACACAGCGAGTCTGATCTGTCAAGAGCTGAACTGTGGAAGATCTGGCAGTGAACCCAGTAATTCAGAGGGACTGAGAACCCTTAGTTGGCTTGATTTTGTTAAATGTAGACGACATGACTCCTCTGTATGGCAGTGTCCATCTGCACCCTGGGAACTAAAAGACTGTGGTGATGAAGTGGCAAGGATCACCTGTTCAGCTCATGTTCCTCTCAGACTGCGTGGAGGGGGCGGCCGGTGCTCTGGGAGGCTGGAGGTGTATCATAACGCTGTGTGGGGCTCAGTCTGTGATAATCTCTGGGACATCAGCGATGCTCAGGTGGTCTGCAGGCAGCTGGGATGTGGAGCAGCACTGAGGGCTGATGGAAATTCAGCCTTTGGTGCTGGTGAAGGTGTGGTGTGGCTGAACAGAGTCCAGTGCAGAGGGAATGAGCTTCACCTGTGGGACTGTCCTCTCTCCCTGAACAACCACACTGACTGCTCCCACAAAGAGCACGCTGGACTCACCTGTACAGACTTGACAGGTTTGCCTGTGTCCACTACTTCTGCCACATCAGCATCATCTTCTGCTGCAGTTTCTCAGACAGTGAGCTCAACATCAGTCTCTCCTCCACAAAATGGTCCAGAAACTCTCCCAGTCCCTCCAGTGCTGGTGATTGTACTGGGGGTTGTGCTCTTACTGCTCTTAGTGCCGCTGCTTATACTGATTCAGCAGAACAGAGTGATGAGGAGAGCTCTCTCTAAGAGGAGACACAGGACCACCACTGCGGCCGTTTATGAGGAGATTCAGCCCAAACACAATCACTTCACTCAGGCCGGAATAGTGCCTTCAGGAGAACAGCATTCTGGGTATGAAGATGTTGAGAAG

Function


symbol description
si:dkey-21h14.12 Predicted to enable scavenger receptor activity. Predicted to be located in membrane. Predicted to be integral component of membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096184

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00055410 True 3176 mRNA 0.50 12 11070864 11077872

Neighbor


gene id symbol gene type direction distance location
XLOC_028562 si:dkey-21h14.15 coding downstream 3533 11066785 ~ 11067331 (-)
XLOC_028561 si:dkey-21h14.8 coding downstream 6791 11054309 ~ 11064073 (-)
XLOC_028560 mettl25 coding downstream 17321 11035103 ~ 11053543 (-)
XLOC_028559 si:ch211-161n3.3 coding downstream 46020 10959442 ~ 11024844 (-)
XLOC_028558 si:ch211-161n3.4 coding downstream 112790 10949389 ~ 10958074 (-)
XLOC_028564 si:dkey-21h14.3 coding upstream 1186 11079058 ~ 11081961 (-)
XLOC_028565 si:dkey-21h14.12 coding upstream 6337 11084209 ~ 11098539 (-)
XLOC_028566 si:dkey-21h14.12 coding upstream 21169 11099041 ~ 11106856 (-)
XLOC_028567 si:dkey-21h14.10 coding upstream 34708 11112580 ~ 11122638 (-)
XLOC_028568 BX784029.1 coding upstream 46741 11124613 ~ 11132617 (-)
XLOC_028555 NA non-coding downstream 235244 10766014 ~ 10835620 (-)
XLOC_028556 NA non-coding downstream 285210 10771874 ~ 10785654 (-)
XLOC_028554 NA non-coding downstream 317923 10748977 ~ 10752941 (-)
XLOC_028553 BX897748.1 non-coding downstream 409187 10661561 ~ 10661677 (-)
XLOC_028551 NA non-coding downstream 722252 10346738 ~ 10348612 (-)
XLOC_028570 BX784029.2 non-coding upstream 101637 11179509 ~ 11186936 (-)
XLOC_028571 BX649349.2 non-coding upstream 167460 11245332 ~ 11248285 (-)
XLOC_028574 NA non-coding upstream 528886 11606758 ~ 11606855 (-)
XLOC_028575 dre-mir-29b-2 non-coding upstream 530324 11608196 ~ 11608283 (-)

Expression



Co-expression Network