G939630


Basic Information

Item Value
gene id G939630
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 8010484 ~ 8010832 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1071685
ctctgttatagccagctagccaacatagcatccctcggttatagccagctagccaacatagcatccctctgttatagccagctagccaacatagcatccctctgttatagccagctagctaacatagcatccctctgttatagccagctagctaacatagcatccccctgtttgagcagggtgttttagtaggctaaactagctagttgcatttgctagctaagtaagtgaaactgaaggGGGGAAAAtgacatctctctccatctcttgctTTTCTTTAATTTGGGAAGAAAttcatttgttcaaaactgttaactactgtctttctctctctttgagtcaactaccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1071685 True 349 lncRNA 0.43 1 8010484 8010832

Neighbor

gene id symbol gene type direction distance location
LOC110535207 LOC106579684 coding upstream 38673 7969927 ~ 7971811 (+)
LOC110536543 LOC106579684 coding upstream 41483 7963009 ~ 7969001 (+)
LOC110535203 LOC106579691 coding upstream 508028 7447414 ~ 7502456 (+)
LOC110535202 LOC106579690 coding upstream 583221 7370843 ~ 7427263 (+)
LOC110535201 LOC106579689 coding upstream 959080 7012348 ~ 7051408 (+)
LOC110536601 NA coding downstream 161040 8171872 ~ 8174025 (+)
LOC118937436 NA coding downstream 163961 8174793 ~ 8175785 (+)
LOC110535212 LOC106579665 coding downstream 184775 8195607 ~ 8379328 (+)
LOC118937462 NA coding downstream 283514 8294346 ~ 8337640 (+)
LOC110536544 LOC106590277 coding downstream 370538 8379847 ~ 8497020 (+)
G939619 NA non-coding upstream 18045 7992161 ~ 7992439 (+)
G939608 NA non-coding upstream 30638 7975739 ~ 7979846 (+)
G939607 NA non-coding upstream 35925 7974268 ~ 7974559 (+)
G939580 NA non-coding upstream 96167 7913971 ~ 7914317 (+)
G939542 NA non-coding upstream 191595 7815789 ~ 7818889 (+)
G939631 NA non-coding downstream 7970 8018802 ~ 8019291 (+)
G939635 NA non-coding downstream 30234 8041066 ~ 8041522 (+)
G939597 LOC106603998 non-coding downstream 36115 8046947 ~ 8055889 (+)
G939660 NA non-coding downstream 73904 8084736 ~ 8086337 (+)
G939686 NA non-coding downstream 119229 8130061 ~ 8130373 (+)
G939544 NA other upstream 187167 7820520 ~ 7823317 (+)
G939408 NA other upstream 435575 7574352 ~ 7574909 (+)
G938723 NA other upstream 989060 7019151 ~ 7021424 (+)
G937889 NA other upstream 1888215 6121584 ~ 6122269 (+)
G937237 NA other upstream 2505155 5504704 ~ 5505329 (+)
G939690 NA other downstream 129434 8140266 ~ 8140583 (+)
G940102 NA other downstream 363674 8374506 ~ 8377928 (+)
G940247 NA other downstream 428648 8439480 ~ 8439775 (+)

Expression


Co-expression Network