G939635


Basic Information

Item Value
gene id G939635
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 8041066 ~ 8041522 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1071690
acacaacacacagggtTTAATAGTGAAGGGAAATCCTGTATACACTCTCACTAGAGGTCATTTGGAGTCAAAACAAACTGGACAGATGATAAGATTTAAACAACCAGATCAAAACTATACATCCAATCCTGCTTCCTAACAGTCTCGGTACATGGCTCCTGCTTCCTAACAGTCTCGGTACATGGCTCCTGCTTCCTAACAGTCTCGGTACATGGCTCCTGCTTCCTAACAGTCTCGGTACATGGCTCCTGCTTCCTAACATTCTCGGTACATGGCTCCTGCTTCCTAACAGTCTCGGTACATGGCTCCTGCTTCCTAACATCCTAACAGTCTCGGTACATGGCTCCTGCTTCCTAACAGTCTCGGT

Function

NR:

description
PREDICTED: pre-mRNA 3' end processing protein WDR33-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1071690 True 367 lncRNA 0.47 2 8041066 8041522

Neighbor

gene id symbol gene type direction distance location
LOC110535207 LOC106579684 coding upstream 69255 7969927 ~ 7971811 (+)
LOC110536543 LOC106579684 coding upstream 72065 7963009 ~ 7969001 (+)
LOC110535203 LOC106579691 coding upstream 538610 7447414 ~ 7502456 (+)
LOC110535202 LOC106579690 coding upstream 613803 7370843 ~ 7427263 (+)
LOC110535201 LOC106579689 coding upstream 989662 7012348 ~ 7051408 (+)
LOC110536601 NA coding downstream 130350 8171872 ~ 8174025 (+)
LOC118937436 NA coding downstream 133271 8174793 ~ 8175785 (+)
LOC110535212 LOC106579665 coding downstream 154085 8195607 ~ 8379328 (+)
LOC118937462 NA coding downstream 252824 8294346 ~ 8337640 (+)
LOC110536544 LOC106590277 coding downstream 339848 8379847 ~ 8497020 (+)
G939631 NA non-coding upstream 21775 8018802 ~ 8019291 (+)
G939630 NA non-coding upstream 30234 8010484 ~ 8010832 (+)
G939619 NA non-coding upstream 48627 7992161 ~ 7992439 (+)
G939608 NA non-coding upstream 61220 7975739 ~ 7979846 (+)
G939607 NA non-coding upstream 66507 7974268 ~ 7974559 (+)
G939597 LOC106603998 non-coding downstream 5425 8046947 ~ 8055889 (+)
G939660 NA non-coding downstream 43214 8084736 ~ 8086337 (+)
G939686 NA non-coding downstream 88539 8130061 ~ 8130373 (+)
G939970 NA non-coding downstream 113880 8155402 ~ 8155616 (+)
G940087 NA non-coding downstream 308860 8350382 ~ 8351339 (+)
G939544 NA other upstream 217749 7820520 ~ 7823317 (+)
G939408 NA other upstream 466157 7574352 ~ 7574909 (+)
G938723 NA other upstream 1019642 7019151 ~ 7021424 (+)
G937889 NA other upstream 1918797 6121584 ~ 6122269 (+)
G937237 NA other upstream 2535737 5504704 ~ 5505329 (+)
G939690 NA other downstream 98744 8140266 ~ 8140583 (+)
G940102 NA other downstream 332984 8374506 ~ 8377928 (+)
G940247 NA other downstream 397958 8439480 ~ 8439775 (+)

Expression


Co-expression Network