G939660


Basic Information

Item Value
gene id G939660
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 8084736 ~ 8086337 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1071716
tggttagagtgtagaggtggtaggtagtctagtggttagagtgtagaggtggcaggtagcctagtggttagagtgtagaggtggcaggtagtctagtggttagagtgtagaggtggcagggtagcctagtggttagagtgtagaggtggcaggtagcctagtggttagagtgtagaggtggcaggtagcctagtggttagagtgtagaggtggcaggtagcctagtggttagggtgtagaggtggcaggtagcctagtggttagagtgtagaagtggcagggtagcctagtggttagagtgtagaagtggcagggtagcctagtggttagagtgtagaagtggcagggtagcctagtgtttagcgTGTAGaagtggcagggtggcctagtggttagagtgtagaagtggcagggtagcctagtggttagagtgtagaagtggcagggtagcctagtggttagagtgtagaagtggcagggtagcctagtggttagggtgtagaggtggcaggtagcctagtggttagagtgtagaggtgg
>TU1071719
tggttagagtgtagaggtggtaggtagtctagtggttagagtgtagaggtggcaggtagcctagtggttagagtgtagaggtggcaggtagtctagtggttagagtgtagaggtggcagggtagcctagtggttagagtgtagaggtggcagggtagcctggtggttagagtgtagaggtggcagggtagcctagtggttagagtgtagaggtggcagggtagcctagtggttagagtgtagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1071716 False 540 lncRNA 0.52 3 8084736 8086337
TU1071719 True 244 lncRNA 0.52 3 8084736 8086044

Neighbor

gene id symbol gene type direction distance location
LOC110535207 LOC106579684 coding upstream 112925 7969927 ~ 7971811 (+)
LOC110536543 LOC106579684 coding upstream 115735 7963009 ~ 7969001 (+)
LOC110535203 LOC106579691 coding upstream 582280 7447414 ~ 7502456 (+)
LOC110535202 LOC106579690 coding upstream 657473 7370843 ~ 7427263 (+)
LOC110535201 LOC106579689 coding upstream 1033332 7012348 ~ 7051408 (+)
LOC110536601 NA coding downstream 85535 8171872 ~ 8174025 (+)
LOC118937436 NA coding downstream 88456 8174793 ~ 8175785 (+)
LOC110535212 LOC106579665 coding downstream 109270 8195607 ~ 8379328 (+)
LOC118937462 NA coding downstream 208009 8294346 ~ 8337640 (+)
LOC110536544 LOC106590277 coding downstream 295033 8379847 ~ 8497020 (+)
G939597 LOC106603998 non-coding upstream 28847 8046947 ~ 8055889 (+)
G939635 NA non-coding upstream 43214 8041066 ~ 8041522 (+)
G939631 NA non-coding upstream 65445 8018802 ~ 8019291 (+)
G939630 NA non-coding upstream 73904 8010484 ~ 8010832 (+)
G939619 NA non-coding upstream 92297 7992161 ~ 7992439 (+)
G939686 NA non-coding downstream 43724 8130061 ~ 8130373 (+)
G939970 NA non-coding downstream 69065 8155402 ~ 8155616 (+)
G940087 NA non-coding downstream 264045 8350382 ~ 8351339 (+)
G940105 NA non-coding downstream 301683 8388020 ~ 8388242 (+)
G940108 NA non-coding downstream 311235 8397572 ~ 8397803 (+)
G939544 NA other upstream 261419 7820520 ~ 7823317 (+)
G939408 NA other upstream 509827 7574352 ~ 7574909 (+)
G938723 NA other upstream 1063312 7019151 ~ 7021424 (+)
G937889 NA other upstream 1962467 6121584 ~ 6122269 (+)
G937237 NA other upstream 2579407 5504704 ~ 5505329 (+)
G939690 NA other downstream 53929 8140266 ~ 8140583 (+)
G940102 NA other downstream 288169 8374506 ~ 8377928 (+)
G940247 NA other downstream 353143 8439480 ~ 8439775 (+)

Expression


Co-expression Network