G940110


Basic Information

Item Value
gene id G940110
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 8401369 ~ 8401606 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1072207
GATCTGCATTTCACTAAATGGTTCCCGAAGCATGTTATCGATTGGCTCACCTACAGGAAGTTTGACGTTGTTTAATTCCAGGAACAAATCTTTTATTCTTCCAATAAGGGACAGTTCATCAATAGGCCATTACTCTAGTGTAATCACAGGAAATTAACAGTGTACCCATTTCCTATTAGTCATGCAGCTTGTCAGAAGGATTGTGGGATTGCAGTTGTTGCTAGTCATAAATTATTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1072207 True 238 lncRNA 0.38 1 8401369 8401606

Neighbor

gene id symbol gene type direction distance location
LOC118937462 NA coding upstream 63729 8294346 ~ 8337640 (+)
LOC110535212 LOC106579665 coding upstream 175331 8195607 ~ 8379328 (+)
LOC118937436 NA coding upstream 225584 8174793 ~ 8175785 (+)
LOC110536601 NA coding upstream 227344 8171872 ~ 8174025 (+)
LOC110535207 LOC106579684 coding upstream 429558 7969927 ~ 7971811 (+)
LOC110535213 LOC106579667 coding downstream 248832 8650438 ~ 8685656 (+)
LOC110535219 NA coding downstream 397934 8799540 ~ 8802257 (+)
LOC118937463 NA coding downstream 443959 8845565 ~ 8855476 (+)
LOC110535221 LOC106579618 coding downstream 455500 8857106 ~ 8860218 (+)
LOC100135908 LOC100135908 coding downstream 467970 8869576 ~ 8880714 (+)
G940108 NA non-coding upstream 3566 8397572 ~ 8397803 (+)
G940105 NA non-coding upstream 13127 8388020 ~ 8388242 (+)
G940087 NA non-coding upstream 50030 8350382 ~ 8351339 (+)
G939970 NA non-coding upstream 245753 8155402 ~ 8155616 (+)
G939686 NA non-coding upstream 270996 8130061 ~ 8130373 (+)
G940233 NA non-coding downstream 8512 8410118 ~ 8410328 (+)
G940234 NA non-coding downstream 8826 8410432 ~ 8410666 (+)
G940239 NA non-coding downstream 22894 8424500 ~ 8424736 (+)
G940249 NA non-coding downstream 39414 8441020 ~ 8441243 (+)
G940258 NA non-coding downstream 46443 8448049 ~ 8448255 (+)
LOC110536544 LOC106590277 other upstream 19789 8379847 ~ 8497020 (+)
G940102 NA other upstream 23441 8374506 ~ 8377928 (+)
G939690 NA other upstream 260786 8140266 ~ 8140583 (+)
G939544 NA other upstream 578052 7820520 ~ 7823317 (+)
G940247 NA other downstream 37874 8439480 ~ 8439775 (+)
G940313 NA other downstream 130934 8532540 ~ 8540867 (+)
G940376 NA other downstream 249898 8651504 ~ 8652993 (+)
G941893 NA other downstream 1843503 10245109 ~ 10245506 (+)

Expression


Co-expression Network