XLOC_028566 (si:dkey-21h14.12)


Basic Information

Item Value
gene id XLOC_028566
gene name si:dkey-21h14.12
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 11099041 ~ 11106856 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055413
AGAAAATCCAAATGCTGCTTTCTGATTTGTCACTGATTGTGTTTGATGATTTCCTCTGTTGTGTCTAATAAGGTAACAGTGAGAGTCATTGGCAGCtgtgagtctctctctctctctttaggaGCTCACAAGTGACACTTTCTTCATTCTGAGCAGAGAAGCAGAggacaaacacacagagaaagacaGACGGGGTGATgagaaaagatggatggatgcttGACACTTGTTTTACTCTCTATACTCACAATATCCAGATCTGATTTTGAGACTGTGAGGTTGTTTGGTGGTAACAGTCCCTGCAGGGGGACTGTAGAGGTTTTTCATGATGGTCAGTGGGGAACTGTGTGTGATGATGAATGGGATCTGACTGATGCTGAAGTGGTGTGTAGAGAACTGAACTGTGGAGATGCAATAGAGGCCTTGAGTATTGCTCGTTTTGGACAAGGATCGGGACCAATCTGGATGGATGAAGTGGACTGTAGTGGATCAGAGTCAACACTGAAAGCCTGTACGTCAAAAGGATGGGGTGAACATAACTGTGGTCATGGGGAAGATGCTGGAGTCATCTATCATAAATATTCTAGACTTGTTGGATCTCACTTGTGCTCTGGACGATTAGAGGTATTTCATGGGAACAAATGGCACACAATGTGTGATGCTGCCTTTGACCAGCAGGATGCAGAGGTTGTGTGTAGAGAGCTGGACTGTGGGGCTCCTGTACAGGTGCTGAGAGCTGCTGCTTTTGACAAAGGAGACGCTCAGATGTGGACACAAGAGATTCACTGCACAGGAAATGAGTCTTATATATCTTTCTGTCCAACATCTTCTCTTAAACACAACTGTACCCATGAAAAATACATTGGACTGTTATGTTCtgGTTATACTGATGTTCGACTGGTCAATGGTCCTGACTTCTGTTCTGGTCGAGTTGAACATCAGTACTACAATAAATGGGGCACAGTGTgtgatgcatgctgggatatgagAGCTGCCAGTGTCCTCTGTAAACAGCTGAATTGTGGGATTGCTGTGTCTGTTGTGGGATCAGACTGGTTTGGAGAGGGAAGTGGTGAAATCTGGGCTGATGTGTTTGATTGTGACGGGAATGAAACAAAACTCTCCGAATGTTCAATCTCTTCATGGAGTCGAGCTGAACGCTCTCATAGACGAGATGTTGGAGTCATCTGCTCTAGCCGCGGGTCCATCAGGCTGGTGGGTTCTGGGGGAGACTGTGCAGGGAGGCTGGAGGTTTTTCACAGCGGCTCATGGGGGACAGTGTGTGACGACTCCTGGGATATTAAAGATGCCCATGTGGTGTGCAGACAGCTGCAGTGTGGAGTGGCCCTCAGTAACCAGCAGGTACCAGCCTGGTTTGGTCCTGGTTCTGGACCCATATGGCTGGATGAGGTGGAGTGTGAGGGGAATGAGACGTCCCTGTGGAGCTGCTCTTCTCCAGGCTGGGGGAAACATGACTGTCTACACAAGGAGGATGTAGGAGTCGTCTGCTCTGAATTTAAAGAGATCCGGTTAACTGAGGGCTGTGAAGGGAATGTGGAGGTTTTCTACAATGGATCCTGGGGAAATGTGTGCTGGAATCAGATGGACAGAGACACAGTGAGTCTGATCTGTCAGGAGCTGAACTGTGGAAGATCTGGAGTTTTGTCTGATTCAACATCAAGACTGAAATCAGCTCGAAACTGGCTTGATAAAGTTAAATGTCGACTACATGACTCTACTTTATGGCATTGTCCATCTTCACTCTGGGGTCAAAACTACTGTGATGAAGATGAGGTGGCCAATGTTACTTGCTCAGttaagaaGAGTGATGAGTCCCCTCGGAGTCATCTGACATGTTCCGCATCTACTCACCAGAGACAGTGCTCAActcatgtTCCTCTCAGACTGCGTGGAGGGGATGGCCGGTGCTCTGGGAGGCTGGAGGTGTATCATAACGCTGTGTGGGGCTCAGTCTGTGATGATCTCTGGGACATCAGCGATGCTCAGGTGGTCTGCAGGCAGCTGGGTTGTGGAGCAGCACTGAGGGCTGATGGGAATTCAGCCTTTGGTGCTGGTGAAGGTGTTGTGTGGCTGAACAGAGTCCAGTGCAGAGGGAATGAGCTTCACTTGTGGGACTGTCCTCTCTCCCTGAACAACCACACTGACTGCTCCCACAAAGAGCACGCTGGACTCACCTGTGCAGACTTGCCGGATATATCAGTGTCCACTACTCCTGCCACATCAGAATCATCTTCTGCTGCAGTTTCTCAGACAGTGAGCTCAAGATTAGTCTCTCCTCCACAAACTGGTCCAGAAACTCTCCCAGTCCCCCCAGTGCTGCTGATTGTACTGGGAGTTGTGCTCTTACTGCTCTTAGTGCCGCTGCTTATACTGATTCAGCAGAACAGAGTGATGAGGAGAGCTCTCTCTAAGAGGAGACACAGAACCACCACTGAGGCCGTTTATGAGGAGATTCAGCACAAACACCAACACTTCACTCACAGGGGGAGATTCAATTCTGAAGAACTGCAATCTGGGTATGAAGATGCAGACGAGTTTCTCTCAGAAAAAGAGTTCAAGACGGCTTATTATGATGATGTCACCAGCAACAGTGGTCTAGAAGAAAATATGGTGAAGGAAATCACTCCAGGATATTATGATGATGTCATCACTGACGGCTTGAAGCCAGATCTAGAGACAGAAGACAGACCTGAGAGTTATGATGATGTCATGATGAGTGAAGAGACCTCTGTTATTAAAAAAGTGGACAATCCAGAGTATTATGATGATGTAATTATTAATGGACAGAATCTTGATCATTTAACAGAGGGAGATCAGGAAGAGTATGATGATGTGAAGAACAACAATGAAGATGAGAGAAACCTCTTGGACTATGATGATGTAGAGGAGGAATCAACTAATGAGGGAGGGGTCATATGACTCAGTGGCCACACCCACTGCCTCTGTTGATGAAATCACATTATATTTACTGGAGATACTGAGAGTTTCTTATTTTACTATTGCATAAGTGCTGTTTTATCTAAtttgattttatatatgtataatctTATGTGCTTTGCaaatttcaata

Function

symbol description
si:dkey-21h14.12 Predicted to enable scavenger receptor activity. Predicted to be located in membrane. Predicted to be integral component of membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096156

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055413 True 3091 mRNA 0.46 17 11099041 11106856

Neighbor

gene id symbol gene type direction distance location
XLOC_028565 si:dkey-21h14.12 coding downstream 502 11084209 ~ 11098539 (-)
XLOC_028564 si:dkey-21h14.3 coding downstream 17080 11079058 ~ 11081961 (-)
XLOC_028563 si:dkey-21h14.12 coding downstream 21169 11070864 ~ 11077872 (-)
XLOC_028562 si:dkey-21h14.15 coding downstream 31710 11066785 ~ 11067331 (-)
XLOC_028561 si:dkey-21h14.8 coding downstream 34968 11054309 ~ 11064073 (-)
XLOC_028567 si:dkey-21h14.10 coding upstream 5724 11112580 ~ 11122638 (-)
XLOC_028568 BX784029.1 coding upstream 17757 11124613 ~ 11132617 (-)
XLOC_028569 prmt8b coding upstream 37744 11144600 ~ 11165961 (-)
XLOC_028570 BX784029.2 coding upstream 72653 11179509 ~ 11186936 (-)
XLOC_028571 BX649349.2 coding upstream 138476 11245332 ~ 11248285 (-)
XLOC_028555 NA non-coding downstream 263421 10766014 ~ 10835620 (-)
XLOC_028556 NA non-coding downstream 313387 10771874 ~ 10785654 (-)
XLOC_028554 NA non-coding downstream 346100 10748977 ~ 10752941 (-)
XLOC_028553 BX897748.1 non-coding downstream 437364 10661561 ~ 10661677 (-)
XLOC_028551 NA non-coding downstream 750429 10346738 ~ 10348612 (-)
XLOC_028574 NA non-coding upstream 499902 11606758 ~ 11606855 (-)
XLOC_028575 dre-mir-29b-2 non-coding upstream 501340 11608196 ~ 11608283 (-)

Expression


Co-expression Network