G940260


Basic Information

Item Value
gene id G940260
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 8450061 ~ 8450458 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1072380
AGGTTAGGCTATAGGGCTTATCTAGGTTAGGCTATAGGGCTTATCTAGGTTAGGCTATAGGGCGTATCTAGGTTAGCCTATAGGGCTTATCTAGGTTAGGCTATAGGGCTTATCTAGGTTAGCCTATAGGGCTTATCTAGGTTAGGCTATAGGGCTTATCTAGGTTAGGCTATAGGGCTTATCTAGGTTAGGCTATAGGGCTTATCCCTCTCtcagatcaaataaaataaattgacTGCTATAGTTACATTAAGCGGGTAGGTCATTGGATATGttgtcttacctcctttagtaatCACAGTAATCGCTTTTAGTTATTGGTCCAGgattgtctttaaaaaaaaacgttttgcctctttgggagttttgaagtgtcgcatggctccttggtgaagaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1072380 True 398 lncRNA 0.41 1 8450061 8450458

Neighbor

gene id symbol gene type direction distance location
LOC118937462 NA coding upstream 112421 8294346 ~ 8337640 (+)
LOC110535212 LOC106579665 coding upstream 224023 8195607 ~ 8379328 (+)
LOC118937436 NA coding upstream 274276 8174793 ~ 8175785 (+)
LOC110536601 NA coding upstream 276036 8171872 ~ 8174025 (+)
LOC110535207 LOC106579684 coding upstream 478250 7969927 ~ 7971811 (+)
LOC110535213 LOC106579667 coding downstream 199980 8650438 ~ 8685656 (+)
LOC110535219 NA coding downstream 349082 8799540 ~ 8802257 (+)
LOC118937463 NA coding downstream 395107 8845565 ~ 8855476 (+)
LOC110535221 LOC106579618 coding downstream 406648 8857106 ~ 8860218 (+)
LOC100135908 LOC100135908 coding downstream 419118 8869576 ~ 8880714 (+)
G940258 NA non-coding upstream 1806 8448049 ~ 8448255 (+)
G940249 NA non-coding upstream 8818 8441020 ~ 8441243 (+)
G940239 NA non-coding upstream 25325 8424500 ~ 8424736 (+)
G940234 NA non-coding upstream 39395 8410432 ~ 8410666 (+)
G940233 NA non-coding upstream 39733 8410118 ~ 8410328 (+)
G940264 NA non-coding downstream 4082 8454540 ~ 8454797 (+)
G940266 NA non-coding downstream 7041 8457499 ~ 8457854 (+)
G940267 NA non-coding downstream 7774 8458232 ~ 8458554 (+)
G940275 NA non-coding downstream 11304 8461762 ~ 8461968 (+)
G940276 NA non-coding downstream 11577 8462035 ~ 8462330 (+)
G940247 NA other upstream 10286 8439480 ~ 8439775 (+)
LOC110536544 LOC106590277 other upstream 68481 8379847 ~ 8497020 (+)
G940102 NA other upstream 72133 8374506 ~ 8377928 (+)
G939690 NA other upstream 309478 8140266 ~ 8140583 (+)
G940313 NA other downstream 82082 8532540 ~ 8540867 (+)
G940376 NA other downstream 201046 8651504 ~ 8652993 (+)
G941893 NA other downstream 1794651 10245109 ~ 10245506 (+)
G942702 NA other downstream 2660268 11110726 ~ 11111336 (+)

Expression


Co-expression Network