G940266


Basic Information

Item Value
gene id G940266
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 8457499 ~ 8457854 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1072386
AAGGGCTTGGTGAACAAACACTCCAAGAAACTCATTAAGAAATTCTAAAAAGTGGCGATGATCAGAGAGGCTGACTCCCTGGAAACCAAGCCAGCGGGAAGATGAGcttagagaggagagataataggagagatggaagagcgATGCAGAGAGGTTCTCTTCTCTTCATGAGAGGTGTTTGGCAGACGACTGAGCTGTCAGGGGATGTAAAGGAAAGAAGAAAAGGATGACTTGATGCAAACCAGGACTCTCGATATGTGTTCCCAGTCCAGGGTGCCCACACACCGGGGCCACGTCGTTTCTGTGGTCGTGCCGTTTTGCGAGGTCCCGGCAGGGACTGGTTCTAAAGCTGCTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1072386 True 356 lncRNA 0.51 1 8457499 8457854

Neighbor

gene id symbol gene type direction distance location
LOC118937462 NA coding upstream 119859 8294346 ~ 8337640 (+)
LOC110535212 LOC106579665 coding upstream 231461 8195607 ~ 8379328 (+)
LOC118937436 NA coding upstream 281714 8174793 ~ 8175785 (+)
LOC110536601 NA coding upstream 283474 8171872 ~ 8174025 (+)
LOC110535207 LOC106579684 coding upstream 485688 7969927 ~ 7971811 (+)
LOC110535213 LOC106579667 coding downstream 192584 8650438 ~ 8685656 (+)
LOC110535219 NA coding downstream 341686 8799540 ~ 8802257 (+)
LOC118937463 NA coding downstream 387711 8845565 ~ 8855476 (+)
LOC110535221 LOC106579618 coding downstream 399252 8857106 ~ 8860218 (+)
LOC100135908 LOC100135908 coding downstream 411722 8869576 ~ 8880714 (+)
G940264 NA non-coding upstream 2702 8454540 ~ 8454797 (+)
G940260 NA non-coding upstream 7041 8450061 ~ 8450458 (+)
G940258 NA non-coding upstream 9244 8448049 ~ 8448255 (+)
G940249 NA non-coding upstream 16256 8441020 ~ 8441243 (+)
G940239 NA non-coding upstream 32763 8424500 ~ 8424736 (+)
G940267 NA non-coding downstream 378 8458232 ~ 8458554 (+)
G940275 NA non-coding downstream 3908 8461762 ~ 8461968 (+)
G940276 NA non-coding downstream 4181 8462035 ~ 8462330 (+)
G940277 NA non-coding downstream 5257 8463111 ~ 8463409 (+)
G940281 NA non-coding downstream 16841 8474695 ~ 8474979 (+)
G940247 NA other upstream 17724 8439480 ~ 8439775 (+)
LOC110536544 LOC106590277 other upstream 75919 8379847 ~ 8497020 (+)
G940102 NA other upstream 79571 8374506 ~ 8377928 (+)
G939690 NA other upstream 316916 8140266 ~ 8140583 (+)
G940313 NA other downstream 74686 8532540 ~ 8540867 (+)
G940376 NA other downstream 193650 8651504 ~ 8652993 (+)
G941893 NA other downstream 1787255 10245109 ~ 10245506 (+)
G942702 NA other downstream 2652872 11110726 ~ 11111336 (+)

Expression


Co-expression Network