G940303


Basic Information

Item Value
gene id G940303
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 8513005 ~ 8573520 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1072448
GTATCATTGTGGTGGCAGCGACACTCGGAGACTCCCGACAAAATTGTTTTTAAAAAGTGTCAGAAAACGAACCATGGAGGAGCTGGACCTGAGTCTGAGTAATGCTCTGACAGACAGCGTCCCCCGGGAGGGTCCAGAGGGCCTGGTGGGGAGAGACTTCGTGGCCCAGCTGGAGTCCGAGGCCTTCGTTGACCAGGTGGGCGAGACGGTGGGCAAGACAGACTACATCCTCCTGATGGACAATGATGGGACCAGGGCAGTACCATCTCTAACCACCACTACCACCGCCAAATGTCCTTCAGCCTGGAGGCCCCTGTAGGAGACCCTGTGGACTCTCTCCTGACTCCCACCACCCCTCCATCAGAATATGGGTTAGGGTGCTCCGCTATCGTCAACATAAgtcctctccctccagctctgACTGGGTTACTGAGCCTAGAGGACCAGAGGATTAGAAAGATGCCTCCAGACACACAGATGAACAGACACACAATTACTATGCAGATATATATGTGTACTGACAGAGTAACATCAGATATATATGTGTACTGACAGAGTAACATCAGATAAATATGTGTACTGACAGAGTAACATCAGATATATGTGTACTCAAAGtagcctccctctccctctctctctctttctctctctctctcactgtctctctctctgtctctctgtatgtctctctctctgtctctctctctgtctctctctttctctctctttctctcattctctctctctttctctctctctctctctcattccctctcgctctctcgtctCACCAACATCCTTGGTATTATGCTTCAGTGGACAAGTTACCACTGCCAGCTTCTCTCCTCCCGTCAGCACCTTGTTTCTCACTGAGCTAACGCTGCCAGCCTGTTCTCCTAACACCAAACTCACACTGCTTCTAGCTGTCCTTGTAATAACTCTGTTTATCAAACAGTGGCATCGTTTCTAACATGCTGATTTTTAACACAAGTGACACTTTCAGACTTTCTCACGTTTCTGTCTTTTAAGTAAATACATGTTTAGGTTAAAATTCCACTTCTTGTAGTCCGTTTCATAGGCCAAAGAGACTGCCCTTACGGTAATCTCAAAGAGACTGCCCTTACGGTAATCTCAAAGAGACTGCCCTTACGGTAATCTCAAAGAGACTGCCCTTACGGTAATCTCAAAGAGACTGCCCTTACGGTAATCTCAAAGAGACTGCCCTTACGGTAATCTCAAAGAGACTGCCCTTACGGTAATCTCAAAGAGACTGCCCTTACGGTAATCTCAAAGAGACTGCCCTTACGGTAATCTTCTTGTAGTCCGTTTCATAGGCCAAAGAGACTGCCCTTTCGGTAATCTCAACGTGCAATATGCAGCTCAATTTTATGCCCGATTACTGATTGGATGTTAAACATAACATTTTAGCATAACAAGGAGTGGTACCTAGACTAGACTCAGACGGTCGTCATCTTGATTTTGGACTACTTTTCGTGCCCTTGATATCAagcctcctgttcctcctctacATAGCACATCTGTGTACTGCGCGCcgtccgcctgtctgtctgtctgtctgtct

Function

NR:

description
microtubule-associated protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1072448 True 1582 lncRNA 0.47 3 8513005 8573520

Neighbor

gene id symbol gene type direction distance location
LOC110536544 LOC106590277 coding upstream 15985 8379847 ~ 8497020 (+)
LOC118937462 NA coding upstream 175365 8294346 ~ 8337640 (+)
LOC110535212 LOC106579665 coding upstream 286967 8195607 ~ 8379328 (+)
LOC118937436 NA coding upstream 337220 8174793 ~ 8175785 (+)
LOC110536601 NA coding upstream 338980 8171872 ~ 8174025 (+)
LOC110535213 LOC106579667 coding downstream 76918 8650438 ~ 8685656 (+)
LOC110535219 NA coding downstream 226020 8799540 ~ 8802257 (+)
LOC118937463 NA coding downstream 272045 8845565 ~ 8855476 (+)
LOC110535221 LOC106579618 coding downstream 283586 8857106 ~ 8860218 (+)
LOC100135908 LOC100135908 coding downstream 296056 8869576 ~ 8880714 (+)
G940297 NA non-coding upstream 5625 8502985 ~ 8507380 (+)
G940281 NA non-coding upstream 38026 8474695 ~ 8474979 (+)
G940277 NA non-coding upstream 49596 8463111 ~ 8463409 (+)
G940276 NA non-coding upstream 50675 8462035 ~ 8462330 (+)
G940350 NA non-coding downstream 33895 8607415 ~ 8607781 (+)
G940355 NA non-coding downstream 39294 8612814 ~ 8615576 (+)
G940376 NA non-coding downstream 77984 8651504 ~ 8652993 (+)
G940402 LOC106590268 non-coding downstream 128916 8702436 ~ 8736722 (+)
G940379 LOC100136486 non-coding downstream 137391 8710911 ~ 8743124 (+)
G940247 NA other upstream 73230 8439480 ~ 8439775 (+)
G940102 NA other upstream 135077 8374506 ~ 8377928 (+)
G939690 NA other upstream 372422 8140266 ~ 8140583 (+)
G941893 NA other downstream 1671589 10245109 ~ 10245506 (+)
G942702 NA other downstream 2537206 11110726 ~ 11111336 (+)
G944957 NA other downstream 4814030 13387550 ~ 13394875 (+)

Expression


Co-expression Network