G940461


Basic Information

Item Value
gene id G940461
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 8837611 ~ 8837834 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1072634
GCTTTTACCTGATAGtagcctactaatgataatatAACTTCAAATACCGAGATGGGTTAACTTAGCTGACCTTCAATTTAGGGAATTCAGCAGAGTTATGAGACATTTGTACAACTCATTGAAActctgaaaataaatacatgggcAAATGTTACCAAACATGATAATAATAGGCCTGCATTACGGTAGGCAGCTAATTGTTAAATTACACTTAACATTCTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1072634 True 224 lncRNA 0.34 1 8837611 8837834

Neighbor

gene id symbol gene type direction distance location
LOC110535219 NA coding upstream 35354 8799540 ~ 8802257 (+)
LOC110535213 LOC106579667 coding upstream 151955 8650438 ~ 8685656 (+)
LOC110536544 LOC106590277 coding upstream 340591 8379847 ~ 8497020 (+)
LOC118937462 NA coding upstream 499971 8294346 ~ 8337640 (+)
LOC110535212 LOC106579665 coding upstream 611573 8195607 ~ 8379328 (+)
LOC118937463 NA coding downstream 7731 8845565 ~ 8855476 (+)
LOC110535221 LOC106579618 coding downstream 19272 8857106 ~ 8860218 (+)
LOC100135908 LOC100135908 coding downstream 31742 8869576 ~ 8880714 (+)
LOC110535228 LOC106579619 coding downstream 51906 8889740 ~ 8933322 (+)
LOC118937299 NA coding downstream 83406 8921240 ~ 8925741 (+)
G940437 NA non-coding upstream 34056 8803230 ~ 8803555 (+)
G940380 NA non-coding upstream 48698 8788498 ~ 8788913 (+)
G940379 LOC100136486 non-coding upstream 94487 8710911 ~ 8743124 (+)
G940402 LOC106590268 non-coding upstream 100889 8702436 ~ 8736722 (+)
G940493 NA non-coding downstream 94037 8931871 ~ 8976279 (+)
G940520 NA non-coding downstream 191720 9029554 ~ 9106845 (+)
G940515 NA non-coding downstream 208950 9046784 ~ 9242084 (+)
G940526 NA non-coding downstream 210771 9048605 ~ 9073783 (+)
G940376 NA other upstream 185090 8651504 ~ 8652993 (+)
G940313 NA other upstream 296744 8532540 ~ 8540867 (+)
G940247 NA other upstream 397836 8439480 ~ 8439775 (+)
G940102 NA other upstream 459683 8374506 ~ 8377928 (+)
G941893 NA other downstream 1407275 10245109 ~ 10245506 (+)
G942702 NA other downstream 2272892 11110726 ~ 11111336 (+)
G944957 NA other downstream 4549716 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 5226714 14064548 ~ 14065869 (+)

Expression


Co-expression Network