XLOC_028570 (BX784029.2)


Basic Information

Item Value
gene id XLOC_028570
gene name BX784029.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 11179509 ~ 11186936 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055421
tggttgagaaaaacaCTGGCATAGAggtagatttttgttttttgtcagctTCTTTAGTGGTGACTTTAGTGGTGCCCCACTGACCTCTACTTTGTAGATGTTGGAGGGGTGGTCTCTCCTTCCACACTGAGGAGTGATGGTCTTACAGCAGCTGTCTGGGACCACTCTTGAATCCGCCGCCTGGGACATGATGTAGACACTGTGCATCCAGTCTAACGAGTTGTTGCTGCCGCAGCACTTGAACTACAAGACAGCTCCTCTGTTCACGTATGACAGCGCAGCAGCCTAAGAAGCCGGTGACCATCACCAGTCCTCCTGCCAGGATTAGGATGTAGGCGGACACGGCGAACGTGCTGGAGGCCAGAAGACTCAGATACTCTCCTTTATCCACCAGAGTCCAGATCCCGACACCCATCACCACTCCACCGCCCATCTGAAGGAGAAAAATACATCACCTAATGCTTCTTTTAATATATAGTATGTATATatccacacactgtaaaaagcaattagttaattttacttttaaaaaagggagtaacctgttgattttaaagtgattagttgattttacttaaggAAAAGTGAGTAACCTGTTGCTGtttttaagcgattagttgactttactttaagaaAAGTGAAtaacctgttgtttttaaaaggatttagttgactttactttaagaaAAGTGAGTAACCTGTTTTTtcaaagggattagttgactttattttaagaaatgtgAATAACCTTttacttttaaaacgattagttgactttactttaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096114

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055421 True 785 lncRNA 0.41 2 11179509 11186936

Neighbor

gene id symbol gene type direction distance location
XLOC_028569 prmt8b coding downstream 13548 11144600 ~ 11165961 (-)
XLOC_028568 BX784029.1 coding downstream 46892 11124613 ~ 11132617 (-)
XLOC_028567 si:dkey-21h14.10 coding downstream 56871 11112580 ~ 11122638 (-)
XLOC_028566 si:dkey-21h14.12 coding downstream 72653 11099041 ~ 11106856 (-)
XLOC_028565 si:dkey-21h14.12 coding downstream 80970 11084209 ~ 11098539 (-)
XLOC_028571 BX649349.2 coding upstream 58396 11245332 ~ 11248285 (-)
XLOC_028572 pimr173 coding upstream 214082 11401018 ~ 11404967 (-)
XLOC_028573 net1 coding upstream 386632 11573568 ~ 11603149 (-)
XLOC_028574 NA coding upstream 419822 11606758 ~ 11606855 (-)
XLOC_028575 dre-mir-29b-2 coding upstream 421260 11608196 ~ 11608283 (-)
XLOC_028555 NA non-coding downstream 343889 10766014 ~ 10835620 (-)
XLOC_028556 NA non-coding downstream 393855 10771874 ~ 10785654 (-)
XLOC_028554 NA non-coding downstream 426568 10748977 ~ 10752941 (-)
XLOC_028553 BX897748.1 non-coding downstream 517832 10661561 ~ 10661677 (-)
XLOC_028576 BX465862.4 non-coding upstream 423782 11610718 ~ 11692199 (-)
XLOC_028578 NA non-coding upstream 566694 11753630 ~ 11754856 (-)

Expression


Co-expression Network