XLOC_028571 (BX649349.2)



Basic Information


Item Value
gene id XLOC_028571
gene name BX649349.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 11245332 ~ 11248285 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00055422
AGGCAAAATCATTTATCAAGCTTCCTACGAAGGCTATAAGAAGAACTGAAAGGGAAAGACGGAATGAATTAATTTCCTTTATCTCCTCGAGTCGTTAGTTCCAGCAGTCATTTGTGGATCACAATGGAAGGCACGCAGACTGGCGGCAAATGAGTATTCATTAGGACGTACAGATGGACGGgcacaaacattcattcacacacaaatagACAGACGCTCGGCACACACTCACAGGGATCGTTCTGCGTGCTCGAGCCTGGGATATTGCGGATTTTACTCCGCTGAATGAGGCCCAATGAGAGATCAAACAGAGCCTCGCTGCACATCTGGATCAGATGAGAGATTTATAGAGCCAGCGTCTAGATACCAGTCAGCCAAAACTGACCCTTGCCACACAGTGATGAGGACTGGCCTGATTTGGGCAAGATCCGCCATTTCCATCCTCACAGCTGCCCCCCGACTGCACTAATCTCCGGCACGGCACACATGCCTACTTAGAGAAAGGGCACAAACATAAGCGTGCCTGCAAAGTCACGGAA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096131

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00055422 True 539 lncRNA 0.49 3 11245332 11248285

Neighbor


gene id symbol gene type direction distance location
XLOC_028570 BX784029.2 coding downstream 58396 11179509 ~ 11186936 (-)
XLOC_028569 prmt8b coding downstream 79371 11144600 ~ 11165961 (-)
XLOC_028568 BX784029.1 coding downstream 112715 11124613 ~ 11132617 (-)
XLOC_028567 si:dkey-21h14.10 coding downstream 122694 11112580 ~ 11122638 (-)
XLOC_028566 si:dkey-21h14.12 coding downstream 138476 11099041 ~ 11106856 (-)
XLOC_028572 pimr173 coding upstream 152733 11401018 ~ 11404967 (-)
XLOC_028573 net1 coding upstream 325283 11573568 ~ 11603149 (-)
XLOC_028574 NA coding upstream 358473 11606758 ~ 11606855 (-)
XLOC_028575 dre-mir-29b-2 coding upstream 359911 11608196 ~ 11608283 (-)
XLOC_028576 BX465862.4 coding upstream 362433 11610718 ~ 11692199 (-)
XLOC_028555 NA non-coding downstream 409712 10766014 ~ 10835620 (-)
XLOC_028556 NA non-coding downstream 459678 10771874 ~ 10785654 (-)
XLOC_028554 NA non-coding downstream 492391 10748977 ~ 10752941 (-)
XLOC_028578 NA non-coding upstream 505345 11753630 ~ 11754856 (-)
XLOC_028579 NA non-coding upstream 506711 11754996 ~ 11758042 (-)

Expression



Co-expression Network