Gene
RNA
| Item | Value |
|---|---|
| gene id | G940526 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 9048605 ~ 9073783 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1072713 | True | 467 | lncRNA | 0.33 | 2 | 9048605 | 9073783 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937300 | NA | coding | upstream | 72201 | 8972920 ~ 8976404 (+) |
| LOC110535229 | LOC106579621 | coding | upstream | 80120 | 8938355 ~ 8968485 (+) |
| LOC110535228 | LOC106579619 | coding | upstream | 115319 | 8889740 ~ 8933322 (+) |
| LOC118937299 | NA | coding | upstream | 122864 | 8921240 ~ 8925741 (+) |
| LOC100135908 | LOC100135908 | coding | upstream | 167891 | 8869576 ~ 8880714 (+) |
| LOC110535237 | LOC106579624 | coding | downstream | 205142 | 9278925 ~ 9296959 (+) |
| LOC118937475 | NA | coding | downstream | 216944 | 9290727 ~ 9290864 (+) |
| LOC100305285 | pdcd6 | coding | downstream | 245249 | 9319032 ~ 9329583 (+) |
| LOC110535239 | LOC106579629 | coding | downstream | 283246 | 9357029 ~ 9405871 (+) |
| LOC118937311 | LOC106579630 | coding | downstream | 337095 | 9410878 ~ 9412277 (+) |
| G940493 | NA | non-coding | upstream | 72326 | 8931871 ~ 8976279 (+) |
| G940461 | NA | non-coding | upstream | 210771 | 8837611 ~ 8837834 (+) |
| G940437 | NA | non-coding | upstream | 245050 | 8803230 ~ 8803555 (+) |
| LOC110535219 | NA | non-coding | upstream | 246370 | 8799540 ~ 8802257 (+) |
| G940573 | NA | non-coding | downstream | 187215 | 9260998 ~ 9261292 (+) |
| G940574 | NA | non-coding | downstream | 188966 | 9262749 ~ 9264652 (+) |
| G940579 | NA | non-coding | downstream | 196860 | 9270643 ~ 9271014 (+) |
| G940586 | NA | non-coding | downstream | 207146 | 9280929 ~ 9281140 (+) |
| G940576 | NA | non-coding | downstream | 223324 | 9297107 ~ 9342601 (+) |
| LOC118937463 | NA | other | upstream | 193168 | 8845565 ~ 8855476 (+) |
| G940376 | NA | other | upstream | 396084 | 8651504 ~ 8652993 (+) |
| G940313 | NA | other | upstream | 507738 | 8532540 ~ 8540867 (+) |
| G940247 | NA | other | upstream | 608830 | 8439480 ~ 8439775 (+) |
| LOC110536544 | LOC106590277 | other | upstream | 667025 | 8379847 ~ 8497020 (+) |
| G941893 | NA | other | downstream | 1171326 | 10245109 ~ 10245506 (+) |
| G942702 | NA | other | downstream | 2036943 | 11110726 ~ 11111336 (+) |
| G944957 | NA | other | downstream | 4313767 | 13387550 ~ 13394875 (+) |
| G946426 | ramp3 | other | downstream | 4990765 | 14064548 ~ 14065869 (+) |
| LOC110535304 | NA | other | downstream | 5081571 | 14154784 ~ 14202999 (+) |
