G941285


Basic Information

Item Value
gene id G941285
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 9637211 ~ 9637489 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1073560
CTGTTGTTAGCTCAGCCACTACAAATGTTACAATGATAATATGTTGTTAGCTCAGCCACTACAAATGTTACAATGACAATCTGTTGTTAGCTCAGCCACTGGacatagaacaaaacatgccTGGTCCATGCTCACCATTAGGATTTATGGTCACTACTGTACATATGCTCTGAGGTTGCTATGGTCACTACTGTACATATGCTCTGAGGTTGCTATGGTCACTACTGTACATATGCTCTGAGGTTGCTATGGTCACTATTGTACATATGCTCTGAGGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1073560 True 279 lncRNA 0.41 1 9637211 9637489

Neighbor

gene id symbol gene type direction distance location
LOC118937311 LOC106579630 coding upstream 224934 9410878 ~ 9412277 (+)
LOC110535239 LOC106579629 coding upstream 231340 9357029 ~ 9405871 (+)
LOC100305285 pdcd6 coding upstream 307628 9319032 ~ 9329583 (+)
LOC110535237 LOC106579624 coding upstream 340252 9278925 ~ 9296959 (+)
LOC110535246 tm14c coding downstream 534360 10171849 ~ 10175528 (+)
LOC118937312 NA coding downstream 629775 10267264 ~ 10269419 (+)
LOC110535248 LOC106579638 coding downstream 668396 10305885 ~ 10367679 (+)
LOC110536547 LOC106579641 coding downstream 757949 10395438 ~ 10624020 (+)
LOC110535252 LOC106579643 coding downstream 993875 10631364 ~ 10639422 (+)
G941278 NA non-coding upstream 4904 9632048 ~ 9632307 (+)
G941246 NA non-coding upstream 28786 9607731 ~ 9608425 (+)
G940715 NA non-coding upstream 113342 9523551 ~ 9523869 (+)
G940711 NA non-coding upstream 118010 9517821 ~ 9519201 (+)
G940681 NA non-coding upstream 168846 9466032 ~ 9468365 (+)
G941295 NA non-coding downstream 25258 9662747 ~ 9664309 (+)
G941381 NA non-coding downstream 223249 9860738 ~ 9860952 (+)
G941382 NA non-coding downstream 223722 9861211 ~ 9861410 (+)
G941527 NA non-coding downstream 253131 9890620 ~ 9891848 (+)
G941528 NA non-coding downstream 254431 9891920 ~ 9892147 (+)
LOC118937463 NA other upstream 781774 8845565 ~ 8855476 (+)
G940376 NA other upstream 984690 8651504 ~ 8652993 (+)
G940313 NA other upstream 1096344 8532540 ~ 8540867 (+)
G940247 NA other upstream 1197436 8439480 ~ 8439775 (+)
LOC110536544 LOC106590277 other upstream 1255631 8379847 ~ 8497020 (+)
G941893 NA other downstream 607620 10245109 ~ 10245506 (+)
G942702 NA other downstream 1473237 11110726 ~ 11111336 (+)
G944957 NA other downstream 3750061 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 4427059 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 4517865 14154784 ~ 14202999 (+)

Expression


Co-expression Network