Gene
RNA
| Item | Value |
|---|---|
| gene id | G941527 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 9890620 ~ 9891848 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1073828 | True | 447 | lncRNA | 0.35 | 2 | 9890620 | 9891848 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937311 | LOC106579630 | coding | upstream | 478343 | 9410878 ~ 9412277 (+) |
| LOC110535239 | LOC106579629 | coding | upstream | 484749 | 9357029 ~ 9405871 (+) |
| LOC100305285 | pdcd6 | coding | upstream | 561037 | 9319032 ~ 9329583 (+) |
| LOC110535237 | LOC106579624 | coding | upstream | 593661 | 9278925 ~ 9296959 (+) |
| LOC110535246 | tm14c | coding | downstream | 280001 | 10171849 ~ 10175528 (+) |
| LOC118937312 | NA | coding | downstream | 375416 | 10267264 ~ 10269419 (+) |
| LOC110535248 | LOC106579638 | coding | downstream | 414037 | 10305885 ~ 10367679 (+) |
| LOC110536547 | LOC106579641 | coding | downstream | 503590 | 10395438 ~ 10624020 (+) |
| LOC110535252 | LOC106579643 | coding | downstream | 739516 | 10631364 ~ 10639422 (+) |
| G941382 | NA | non-coding | upstream | 29210 | 9861211 ~ 9861410 (+) |
| G941381 | NA | non-coding | upstream | 29668 | 9860738 ~ 9860952 (+) |
| G941295 | NA | non-coding | upstream | 226311 | 9662747 ~ 9664309 (+) |
| G941285 | NA | non-coding | upstream | 253131 | 9637211 ~ 9637489 (+) |
| G941278 | NA | non-coding | upstream | 258313 | 9632048 ~ 9632307 (+) |
| G941528 | NA | non-coding | downstream | 72 | 9891920 ~ 9892147 (+) |
| G941535 | NA | non-coding | downstream | 6267 | 9898115 ~ 9898331 (+) |
| G941598 | NA | non-coding | downstream | 54779 | 9946627 ~ 9946843 (+) |
| G941605 | NA | non-coding | downstream | 66408 | 9958256 ~ 9958491 (+) |
| G941606 | NA | non-coding | downstream | 67528 | 9959376 ~ 9959659 (+) |
| LOC118937463 | NA | other | upstream | 1035183 | 8845565 ~ 8855476 (+) |
| G940376 | NA | other | upstream | 1238099 | 8651504 ~ 8652993 (+) |
| G940313 | NA | other | upstream | 1349753 | 8532540 ~ 8540867 (+) |
| G940247 | NA | other | upstream | 1450845 | 8439480 ~ 8439775 (+) |
| LOC110536544 | LOC106590277 | other | upstream | 1509040 | 8379847 ~ 8497020 (+) |
| G941893 | NA | other | downstream | 353261 | 10245109 ~ 10245506 (+) |
| G942702 | NA | other | downstream | 1218878 | 11110726 ~ 11111336 (+) |
| G944957 | NA | other | downstream | 3495702 | 13387550 ~ 13394875 (+) |
| G946426 | ramp3 | other | downstream | 4172700 | 14064548 ~ 14065869 (+) |
| LOC110535304 | NA | other | downstream | 4263506 | 14154784 ~ 14202999 (+) |
