G941605


Basic Information

Item Value
gene id G941605
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 9958256 ~ 9958491 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1073911
TGTTTTACAGTGACATGTTGTGCCTTCACATAGAACCACAGTCGTTTAAGTATTTCTCCACCCTGAACTCCATTCCTTTTTGCTACCCAATATCAACAATCCAGATTCAATAAgccaggtttactaagctatataaaggtcaggtttactaagctatataaaggtcaggtttactaagctttataaaggtcaggtttactaagctttataaaggtcaggtttactaagctttataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1073911 True 236 lncRNA 0.35 1 9958256 9958491

Neighbor

gene id symbol gene type direction distance location
LOC118937311 LOC106579630 coding upstream 545979 9410878 ~ 9412277 (+)
LOC110535239 LOC106579629 coding upstream 552385 9357029 ~ 9405871 (+)
LOC100305285 pdcd6 coding upstream 628673 9319032 ~ 9329583 (+)
LOC110535237 LOC106579624 coding upstream 661297 9278925 ~ 9296959 (+)
LOC110535246 tm14c coding downstream 213358 10171849 ~ 10175528 (+)
LOC118937312 NA coding downstream 308773 10267264 ~ 10269419 (+)
LOC110535248 LOC106579638 coding downstream 347394 10305885 ~ 10367679 (+)
LOC110536547 LOC106579641 coding downstream 436947 10395438 ~ 10624020 (+)
LOC110535252 LOC106579643 coding downstream 672873 10631364 ~ 10639422 (+)
G941598 NA non-coding upstream 11413 9946627 ~ 9946843 (+)
G941535 NA non-coding upstream 59925 9898115 ~ 9898331 (+)
G941528 NA non-coding upstream 66109 9891920 ~ 9892147 (+)
G941527 NA non-coding upstream 66408 9890620 ~ 9891848 (+)
G941382 NA non-coding upstream 96846 9861211 ~ 9861410 (+)
G941606 NA non-coding downstream 885 9959376 ~ 9959659 (+)
G941607 NA non-coding downstream 1189 9959680 ~ 9960531 (+)
G941608 NA non-coding downstream 2506 9960997 ~ 9961874 (+)
G941609 NA non-coding downstream 3456 9961947 ~ 9965255 (+)
G941611 NA non-coding downstream 9702 9968193 ~ 9969237 (+)
LOC118937463 NA other upstream 1102819 8845565 ~ 8855476 (+)
G940376 NA other upstream 1305735 8651504 ~ 8652993 (+)
G940313 NA other upstream 1417389 8532540 ~ 8540867 (+)
G940247 NA other upstream 1518481 8439480 ~ 8439775 (+)
LOC110536544 LOC106590277 other upstream 1576676 8379847 ~ 8497020 (+)
G941893 NA other downstream 286618 10245109 ~ 10245506 (+)
G942702 NA other downstream 1152235 11110726 ~ 11111336 (+)
G944957 NA other downstream 3429059 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 4106057 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 4196863 14154784 ~ 14202999 (+)

Expression


Co-expression Network