G941606


Basic Information

Item Value
gene id G941606
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 9959376 ~ 9959659 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1073912
ttactaagctttataaaggtcaggtttactaagctttatgaaggtcaggtttactaagctttataaaggtcaggtttactaagctttataaaggtcaggtttactaagctatacAAAGGTCAGGTTTTCTAAGCTATACAAAgctcaggtttactaagctatacAAAGGTCAGGTTTgctaagctttataaaggtcaggtttactaagctttatacaggccacgtttactaagctttataaagtccaggcttactaagctttataaaggtcaggtttactaagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1073912 True 284 lncRNA 0.35 1 9959376 9959659

Neighbor

gene id symbol gene type direction distance location
LOC118937311 LOC106579630 coding upstream 547099 9410878 ~ 9412277 (+)
LOC110535239 LOC106579629 coding upstream 553505 9357029 ~ 9405871 (+)
LOC100305285 pdcd6 coding upstream 629793 9319032 ~ 9329583 (+)
LOC110535237 LOC106579624 coding upstream 662417 9278925 ~ 9296959 (+)
LOC110535246 tm14c coding downstream 212190 10171849 ~ 10175528 (+)
LOC118937312 NA coding downstream 307605 10267264 ~ 10269419 (+)
LOC110535248 LOC106579638 coding downstream 346226 10305885 ~ 10367679 (+)
LOC110536547 LOC106579641 coding downstream 435779 10395438 ~ 10624020 (+)
LOC110535252 LOC106579643 coding downstream 671705 10631364 ~ 10639422 (+)
G941605 NA non-coding upstream 885 9958256 ~ 9958491 (+)
G941598 NA non-coding upstream 12533 9946627 ~ 9946843 (+)
G941535 NA non-coding upstream 61045 9898115 ~ 9898331 (+)
G941528 NA non-coding upstream 67229 9891920 ~ 9892147 (+)
G941527 NA non-coding upstream 67528 9890620 ~ 9891848 (+)
G941607 NA non-coding downstream 21 9959680 ~ 9960531 (+)
G941608 NA non-coding downstream 1338 9960997 ~ 9961874 (+)
G941609 NA non-coding downstream 2288 9961947 ~ 9965255 (+)
G941611 NA non-coding downstream 8534 9968193 ~ 9969237 (+)
G941613 NA non-coding downstream 10763 9970422 ~ 9970644 (+)
LOC118937463 NA other upstream 1103939 8845565 ~ 8855476 (+)
G940376 NA other upstream 1306855 8651504 ~ 8652993 (+)
G940313 NA other upstream 1418509 8532540 ~ 8540867 (+)
G940247 NA other upstream 1519601 8439480 ~ 8439775 (+)
LOC110536544 LOC106590277 other upstream 1577796 8379847 ~ 8497020 (+)
G941893 NA other downstream 285450 10245109 ~ 10245506 (+)
G942702 NA other downstream 1151067 11110726 ~ 11111336 (+)
G944957 NA other downstream 3427891 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 4104889 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 4195695 14154784 ~ 14202999 (+)

Expression


Co-expression Network