G941613


Basic Information

Item Value
gene id G941613
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 9970422 ~ 9970644 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1073919
cactaggctaccctgccgccgctacactctaaccactaggctaccctgccacccctacactctaaccactaggctaccctgccgcacctacactctaaccactaggctaccctgccacccctacactctaaccactaggctaccctgccgtccctacactctaaccactaggctaccctgccacccctacactctaaccactaggctaccctgccgcccctac

Function

NR:

description
PREDICTED: leucine-rich repeat extensin-like protein 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1073919 True 223 lncRNA 0.59 1 9970422 9970644

Neighbor

gene id symbol gene type direction distance location
LOC118937311 LOC106579630 coding upstream 558145 9410878 ~ 9412277 (+)
LOC110535239 LOC106579629 coding upstream 564551 9357029 ~ 9405871 (+)
LOC100305285 pdcd6 coding upstream 640839 9319032 ~ 9329583 (+)
LOC110535237 LOC106579624 coding upstream 673463 9278925 ~ 9296959 (+)
LOC110535246 tm14c coding downstream 201205 10171849 ~ 10175528 (+)
LOC118937312 NA coding downstream 296620 10267264 ~ 10269419 (+)
LOC110535248 LOC106579638 coding downstream 335241 10305885 ~ 10367679 (+)
LOC110536547 LOC106579641 coding downstream 424794 10395438 ~ 10624020 (+)
LOC110535252 LOC106579643 coding downstream 660720 10631364 ~ 10639422 (+)
G941611 NA non-coding upstream 1185 9968193 ~ 9969237 (+)
G941609 NA non-coding upstream 5167 9961947 ~ 9965255 (+)
G941608 NA non-coding upstream 8548 9960997 ~ 9961874 (+)
G941607 NA non-coding upstream 9891 9959680 ~ 9960531 (+)
G941606 NA non-coding upstream 10763 9959376 ~ 9959659 (+)
G941614 NA non-coding downstream 595 9971239 ~ 9972578 (+)
G941638 NA non-coding downstream 25684 9996328 ~ 9996544 (+)
G941648 LOC106604999 non-coding downstream 34075 10004719 ~ 10004947 (+)
G941672 NA non-coding downstream 52671 10023315 ~ 10023665 (+)
G941674 NA non-coding downstream 53192 10023836 ~ 10024063 (+)
LOC118937463 NA other upstream 1114985 8845565 ~ 8855476 (+)
G940376 NA other upstream 1317901 8651504 ~ 8652993 (+)
G940313 NA other upstream 1429555 8532540 ~ 8540867 (+)
G940247 NA other upstream 1530647 8439480 ~ 8439775 (+)
LOC110536544 LOC106590277 other upstream 1588842 8379847 ~ 8497020 (+)
G941893 NA other downstream 274465 10245109 ~ 10245506 (+)
G942702 NA other downstream 1140082 11110726 ~ 11111336 (+)
G944957 NA other downstream 3416906 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 4093904 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 4184710 14154784 ~ 14202999 (+)

Expression


Co-expression Network