G941638


Basic Information

Item Value
gene id G941638
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 9996328 ~ 9996544 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1073945
ctagctttaagcaccaactgtcagagcagctcacagattactgcacctgtacatagcccacatataatttagccctatcaactacctctttcccaactgtatttaatttatgtatttattttgctcctttgcaccccattatttttatttctactttgcacattcttccattgcaaaactaccattccagtgttttacttgctatattgtatttacc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1073945 True 217 lncRNA 0.36 1 9996328 9996544

Neighbor

gene id symbol gene type direction distance location
LOC118937311 LOC106579630 coding upstream 584051 9410878 ~ 9412277 (+)
LOC110535239 LOC106579629 coding upstream 590457 9357029 ~ 9405871 (+)
LOC100305285 pdcd6 coding upstream 666745 9319032 ~ 9329583 (+)
LOC110535237 LOC106579624 coding upstream 699369 9278925 ~ 9296959 (+)
LOC110535246 tm14c coding downstream 175305 10171849 ~ 10175528 (+)
LOC118937312 NA coding downstream 270720 10267264 ~ 10269419 (+)
LOC110535248 LOC106579638 coding downstream 309341 10305885 ~ 10367679 (+)
LOC110536547 LOC106579641 coding downstream 398894 10395438 ~ 10624020 (+)
LOC110535252 LOC106579643 coding downstream 634820 10631364 ~ 10639422 (+)
G941614 NA non-coding upstream 23750 9971239 ~ 9972578 (+)
G941613 NA non-coding upstream 25684 9970422 ~ 9970644 (+)
G941611 NA non-coding upstream 27091 9968193 ~ 9969237 (+)
G941609 NA non-coding upstream 31073 9961947 ~ 9965255 (+)
G941608 NA non-coding upstream 34454 9960997 ~ 9961874 (+)
G941648 LOC106604999 non-coding downstream 8175 10004719 ~ 10004947 (+)
G941672 NA non-coding downstream 26771 10023315 ~ 10023665 (+)
G941674 NA non-coding downstream 27292 10023836 ~ 10024063 (+)
G941682 NA non-coding downstream 40099 10036643 ~ 10036876 (+)
G941697 NA non-coding downstream 59905 10056449 ~ 10056650 (+)
LOC118937463 NA other upstream 1140891 8845565 ~ 8855476 (+)
G940376 NA other upstream 1343807 8651504 ~ 8652993 (+)
G940313 NA other upstream 1455461 8532540 ~ 8540867 (+)
G940247 NA other upstream 1556553 8439480 ~ 8439775 (+)
LOC110536544 LOC106590277 other upstream 1614748 8379847 ~ 8497020 (+)
G941893 NA other downstream 248565 10245109 ~ 10245506 (+)
G942702 NA other downstream 1114182 11110726 ~ 11111336 (+)
G944957 NA other downstream 3391006 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 4068004 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 4158810 14154784 ~ 14202999 (+)

Expression


Co-expression Network