G941682


Basic Information

Item Value
gene id G941682
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 10036643 ~ 10036876 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1073989
tactgtatttatttatttattttactcctttgcacccaattatttatatctctactttgcacattcttccactgcaaatctaccattccagtgttttacttgctatattgtatttacctcaccaccatggcctttttttgcctttacctcccttatctcacctcatttgctcacattgtatatagacttatttttctactgtattattgactgtatgtttgtttattccatgtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1073989 True 234 lncRNA 0.32 1 10036643 10036876

Neighbor

gene id symbol gene type direction distance location
LOC118937311 LOC106579630 coding upstream 624366 9410878 ~ 9412277 (+)
LOC110535239 LOC106579629 coding upstream 630772 9357029 ~ 9405871 (+)
LOC100305285 pdcd6 coding upstream 707060 9319032 ~ 9329583 (+)
LOC110535237 LOC106579624 coding upstream 739684 9278925 ~ 9296959 (+)
LOC110535246 tm14c coding downstream 134973 10171849 ~ 10175528 (+)
LOC118937312 NA coding downstream 230388 10267264 ~ 10269419 (+)
LOC110535248 LOC106579638 coding downstream 269009 10305885 ~ 10367679 (+)
LOC110536547 LOC106579641 coding downstream 358562 10395438 ~ 10624020 (+)
LOC110535252 LOC106579643 coding downstream 594488 10631364 ~ 10639422 (+)
G941674 NA non-coding upstream 12580 10023836 ~ 10024063 (+)
G941672 NA non-coding upstream 12978 10023315 ~ 10023665 (+)
G941648 LOC106604999 non-coding upstream 31696 10004719 ~ 10004947 (+)
G941638 NA non-coding upstream 40099 9996328 ~ 9996544 (+)
G941614 NA non-coding upstream 64065 9971239 ~ 9972578 (+)
G941697 NA non-coding downstream 19573 10056449 ~ 10056650 (+)
G941710 NA non-coding downstream 37764 10074640 ~ 10075160 (+)
G941768 NA non-coding downstream 97461 10134337 ~ 10134540 (+)
G941804 NA non-coding downstream 133134 10170010 ~ 10170269 (+)
G941808 NA non-coding downstream 141353 10178229 ~ 10178783 (+)
LOC118937463 NA other upstream 1181206 8845565 ~ 8855476 (+)
G940376 NA other upstream 1384122 8651504 ~ 8652993 (+)
G940313 NA other upstream 1495776 8532540 ~ 8540867 (+)
G940247 NA other upstream 1596868 8439480 ~ 8439775 (+)
LOC110536544 LOC106590277 other upstream 1655063 8379847 ~ 8497020 (+)
G941893 NA other downstream 208233 10245109 ~ 10245506 (+)
G942702 NA other downstream 1073850 11110726 ~ 11111336 (+)
G944957 NA other downstream 3350674 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 4027672 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 4118478 14154784 ~ 14202999 (+)

Expression


Co-expression Network