G941768


Basic Information

Item Value
gene id G941768
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 10134337 ~ 10134540 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1074078
atcaattgctatgatgaaactggctgtcttgaggaccgccacagggaagGACATattacccctcaggagactgaaatgatttggaatgggtcctcagatcctcaaaaggttctacagctgcaccatcgagagcatcctgactggttgcatcactgcctggtatggcaactactcggcctccgaccgcaatgcactacagagggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1074078 True 204 lncRNA 0.51 1 10134337 10134540

Neighbor

gene id symbol gene type direction distance location
LOC118937311 LOC106579630 coding upstream 722060 9410878 ~ 9412277 (+)
LOC110535239 LOC106579629 coding upstream 728466 9357029 ~ 9405871 (+)
LOC100305285 pdcd6 coding upstream 804754 9319032 ~ 9329583 (+)
LOC110535237 LOC106579624 coding upstream 837378 9278925 ~ 9296959 (+)
LOC110535246 tm14c coding downstream 37309 10171849 ~ 10175528 (+)
LOC118937312 NA coding downstream 132724 10267264 ~ 10269419 (+)
LOC110535248 LOC106579638 coding downstream 171345 10305885 ~ 10367679 (+)
LOC110536547 LOC106579641 coding downstream 260898 10395438 ~ 10624020 (+)
LOC110535252 LOC106579643 coding downstream 496824 10631364 ~ 10639422 (+)
G941710 NA non-coding upstream 59177 10074640 ~ 10075160 (+)
G941697 NA non-coding upstream 77687 10056449 ~ 10056650 (+)
G941682 NA non-coding upstream 97461 10036643 ~ 10036876 (+)
G941674 NA non-coding upstream 110274 10023836 ~ 10024063 (+)
G941672 NA non-coding upstream 110672 10023315 ~ 10023665 (+)
G941804 NA non-coding downstream 35470 10170010 ~ 10170269 (+)
G941808 NA non-coding downstream 43689 10178229 ~ 10178783 (+)
G941836 gcm2 non-coding downstream 104748 10239288 ~ 10241490 (+)
G941838 NA non-coding downstream 107327 10241867 ~ 10244420 (+)
G941894 NA non-coding downstream 111449 10245989 ~ 10246361 (+)
LOC118937463 NA other upstream 1278900 8845565 ~ 8855476 (+)
G940376 NA other upstream 1481816 8651504 ~ 8652993 (+)
G940313 NA other upstream 1593470 8532540 ~ 8540867 (+)
G940247 NA other upstream 1694562 8439480 ~ 8439775 (+)
LOC110536544 LOC106590277 other upstream 1752757 8379847 ~ 8497020 (+)
G941893 NA other downstream 110569 10245109 ~ 10245506 (+)
G942702 NA other downstream 976186 11110726 ~ 11111336 (+)
G944957 NA other downstream 3253010 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 3930008 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 4020814 14154784 ~ 14202999 (+)

Expression


Co-expression Network