Gene
RNA
| Item | Value |
|---|---|
| gene id | G941808 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 10178229 ~ 10178783 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1074121 | True | 555 | lncRNA | 0.40 | 1 | 10178229 | 10178783 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535246 | tm14c | coding | upstream | 2701 | 10171849 ~ 10175528 (+) |
| LOC118937311 | LOC106579630 | coding | upstream | 765952 | 9410878 ~ 9412277 (+) |
| LOC110535239 | LOC106579629 | coding | upstream | 772358 | 9357029 ~ 9405871 (+) |
| LOC100305285 | pdcd6 | coding | upstream | 848646 | 9319032 ~ 9329583 (+) |
| LOC110535237 | LOC106579624 | coding | upstream | 881270 | 9278925 ~ 9296959 (+) |
| LOC118937312 | NA | coding | downstream | 88481 | 10267264 ~ 10269419 (+) |
| LOC110535248 | LOC106579638 | coding | downstream | 127102 | 10305885 ~ 10367679 (+) |
| LOC110536547 | LOC106579641 | coding | downstream | 216655 | 10395438 ~ 10624020 (+) |
| LOC110535252 | LOC106579643 | coding | downstream | 452581 | 10631364 ~ 10639422 (+) |
| vapa | vapa | coding | downstream | 487424 | 10666207 ~ 10671992 (+) |
| G941804 | NA | non-coding | upstream | 7960 | 10170010 ~ 10170269 (+) |
| G941768 | NA | non-coding | upstream | 43689 | 10134337 ~ 10134540 (+) |
| G941710 | NA | non-coding | upstream | 103069 | 10074640 ~ 10075160 (+) |
| G941697 | NA | non-coding | upstream | 121579 | 10056449 ~ 10056650 (+) |
| G941682 | NA | non-coding | upstream | 141353 | 10036643 ~ 10036876 (+) |
| G941836 | gcm2 | non-coding | downstream | 60505 | 10239288 ~ 10241490 (+) |
| G941838 | NA | non-coding | downstream | 63084 | 10241867 ~ 10244420 (+) |
| G941894 | NA | non-coding | downstream | 67206 | 10245989 ~ 10246361 (+) |
| G941915 | NA | non-coding | downstream | 99852 | 10278635 ~ 10285304 (+) |
| G941925 | NA | non-coding | downstream | 116812 | 10295595 ~ 10296629 (+) |
| LOC118937463 | NA | other | upstream | 1322792 | 8845565 ~ 8855476 (+) |
| G940376 | NA | other | upstream | 1525708 | 8651504 ~ 8652993 (+) |
| G940313 | NA | other | upstream | 1637362 | 8532540 ~ 8540867 (+) |
| G940247 | NA | other | upstream | 1738454 | 8439480 ~ 8439775 (+) |
| LOC110536544 | LOC106590277 | other | upstream | 1796649 | 8379847 ~ 8497020 (+) |
| G941893 | NA | other | downstream | 66326 | 10245109 ~ 10245506 (+) |
| G942702 | NA | other | downstream | 931943 | 11110726 ~ 11111336 (+) |
| G944957 | NA | other | downstream | 3208767 | 13387550 ~ 13394875 (+) |
| G946426 | ramp3 | other | downstream | 3885765 | 14064548 ~ 14065869 (+) |
| LOC110535304 | NA | other | downstream | 3976571 | 14154784 ~ 14202999 (+) |
