G941893


Basic Information

Item Value
gene id G941893
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 10245109 ~ 10245506 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1074217
TGGAAAAAGGTATTTATTAAGGTGGCCAATTGCAAGTTGTTGTTCTCTTtgactctcctctgaagagtggcaacatgggggcctcaaaacaactctcaaatgacctgaaaacaAAGATTGTTCAACATTATGGTTTAGAGGAAAGCTACAAAAAGCTATTGGAGAGATTTAAACTGTCAGTGTCCACTGTGAGGAACATagtgaggaaatggaagaccacaggCACAGTTCTTGTTAAGGCCAGAAGTGGCAGGCCAAGTAAAATATCGGAGAGGCAAAGGCGAAGGATGGTGAGAACGGTcaaaaacagcccacagaccacctccaaagacctacaacatcatcttgctgcagatggtgtcactgtgcatcgttcaacaattcagcacactttgcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1074217 True 398 TUCP 0.44 1 10245109 10245506

Neighbor

gene id symbol gene type direction distance location
LOC110535246 tm14c coding upstream 69581 10171849 ~ 10175528 (+)
LOC118937311 LOC106579630 coding upstream 832832 9410878 ~ 9412277 (+)
LOC110535239 LOC106579629 coding upstream 839238 9357029 ~ 9405871 (+)
LOC100305285 pdcd6 coding upstream 915526 9319032 ~ 9329583 (+)
LOC110535237 LOC106579624 coding upstream 948150 9278925 ~ 9296959 (+)
LOC118937312 NA coding downstream 21758 10267264 ~ 10269419 (+)
LOC110535248 LOC106579638 coding downstream 60379 10305885 ~ 10367679 (+)
LOC110536547 LOC106579641 coding downstream 149932 10395438 ~ 10624020 (+)
LOC110535252 LOC106579643 coding downstream 385858 10631364 ~ 10639422 (+)
vapa vapa coding downstream 420701 10666207 ~ 10671992 (+)
G941838 NA non-coding upstream 689 10241867 ~ 10244420 (+)
G941836 gcm2 non-coding upstream 3619 10239288 ~ 10241490 (+)
G941808 NA non-coding upstream 66326 10178229 ~ 10178783 (+)
G941804 NA non-coding upstream 74840 10170010 ~ 10170269 (+)
G941768 NA non-coding upstream 110569 10134337 ~ 10134540 (+)
G941894 NA non-coding downstream 483 10245989 ~ 10246361 (+)
G941915 NA non-coding downstream 33129 10278635 ~ 10285304 (+)
G941925 NA non-coding downstream 50089 10295595 ~ 10296629 (+)
G941968 NA non-coding downstream 140318 10385824 ~ 10386095 (+)
G941982 NA non-coding downstream 153314 10398820 ~ 10399079 (+)
LOC118937463 NA other upstream 1389672 8845565 ~ 8855476 (+)
G940376 NA other upstream 1592588 8651504 ~ 8652993 (+)
G940313 NA other upstream 1704242 8532540 ~ 8540867 (+)
G940247 NA other upstream 1805334 8439480 ~ 8439775 (+)
LOC110536544 LOC106590277 other upstream 1863529 8379847 ~ 8497020 (+)
G942702 NA other downstream 865220 11110726 ~ 11111336 (+)
G944957 NA other downstream 3142044 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 3819042 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 3909848 14154784 ~ 14202999 (+)
G946644 NA other downstream 4065069 14310575 ~ 14314318 (+)

Expression


Co-expression Network