G941915


Basic Information

Item Value
gene id G941915
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 10278635 ~ 10285304 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1074241
CTAACAGACACACTTTACACCTACTGTACTGTCCCTAACAGACACTATTTACACCTACTGTACTGTCCCTAACAGACACTCTTTACACCTACTGTACTGTCACTAACAGACACTCTTTACACCTACTGTACTGTCACTAACAGACACTCTTTACACCTACTGTACTGTCACTAACAGACACTCCATTTACAGATGCCTTTTCCCAGGGTTATGTTCATTGGGGTACGCAACGGAAAACgtttcaaaatgttttgcaacagaaaatgaaAATATACTATTCTTATTGGAGAAGTCAAGGTTGTCTCTCCCTGTCAGTCTGTTTCTTCCGTTtgatgcctaatgaacacgagCCAGGGTATAAAGGCACTCATATCCCCGACTCAGACATCTCTCTGACCTCTGAGGTTTGTCTTTGAACAACTTACCTCAACCAGCATGTACAGGGAGAGCATGGTCACAGAGAAGTTGTACACTTGTAAGACCCCCTTGAGTGAGTATGCTGGCCTGTTCCTCATGTATTTTGATCCCAGGTATACTGTGAGGAGGTAAAGGATggtgagggagagggtggggagatATGAGTCCATCAGGAGCCATCCTCGTACCCTGGAGTCTCTGTCTTCAAACAGGAAGTAAAAAAGCGCGTTTAACCGCTCGTCCAAACTTTCTAAATGGTTCATCTCTTTTTGCTGGATGTAGAAAGCCCTGTAATTTGTACCGCGAAGGTCAAATAGCGTTGAGATTGTGAGGCACGctaccctggagagagagaggtgggctaTATGTGCACTGTCCAGGGTATCTCAGAATCTGCTTTTAGCTCGCTCTGGCATGCATCCACAAACCCCACGAATTATGGTATGTCATATATGCCGGTCTGTGCTCTGTGATG

Function

NR:

description
elongation of very long chain fatty acids protein 2 isoform X1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1074241 True 892 lncRNA 0.45 3 10278635 10285304

Neighbor

gene id symbol gene type direction distance location
LOC118937312 NA coding upstream 9216 10267264 ~ 10269419 (+)
LOC110535246 tm14c coding upstream 103107 10171849 ~ 10175528 (+)
LOC118937311 LOC106579630 coding upstream 866358 9410878 ~ 9412277 (+)
LOC110535239 LOC106579629 coding upstream 872764 9357029 ~ 9405871 (+)
LOC100305285 pdcd6 coding upstream 949052 9319032 ~ 9329583 (+)
LOC110535248 LOC106579638 coding downstream 20581 10305885 ~ 10367679 (+)
LOC110536547 LOC106579641 coding downstream 110134 10395438 ~ 10624020 (+)
LOC110535252 LOC106579643 coding downstream 346060 10631364 ~ 10639422 (+)
vapa vapa coding downstream 380903 10666207 ~ 10671992 (+)
LOC110535262 LOC106579655 coding downstream 740333 11025637 ~ 11064599 (+)
G941894 NA non-coding upstream 32274 10245989 ~ 10246361 (+)
G941838 NA non-coding upstream 34215 10241867 ~ 10244420 (+)
G941836 gcm2 non-coding upstream 37145 10239288 ~ 10241490 (+)
G941808 NA non-coding upstream 99852 10178229 ~ 10178783 (+)
G941804 NA non-coding upstream 108366 10170010 ~ 10170269 (+)
G941925 NA non-coding downstream 10291 10295595 ~ 10296629 (+)
G941968 NA non-coding downstream 100520 10385824 ~ 10386095 (+)
G941982 NA non-coding downstream 113516 10398820 ~ 10399079 (+)
G941983 NA non-coding downstream 115115 10400419 ~ 10401001 (+)
G941996 NA non-coding downstream 134489 10419793 ~ 10420004 (+)
G941893 NA other upstream 33129 10245109 ~ 10245506 (+)
LOC118937463 NA other upstream 1423198 8845565 ~ 8855476 (+)
G940376 NA other upstream 1626114 8651504 ~ 8652993 (+)
G940313 NA other upstream 1737768 8532540 ~ 8540867 (+)
G940247 NA other upstream 1838860 8439480 ~ 8439775 (+)
G942702 NA other downstream 825422 11110726 ~ 11111336 (+)
G944957 NA other downstream 3102246 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 3779244 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 3870050 14154784 ~ 14202999 (+)
G946644 NA other downstream 4025271 14310575 ~ 14314318 (+)

Expression


Co-expression Network