Gene
RNA
| Item | Value |
|---|---|
| gene id | G941925 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 10295595 ~ 10296629 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1074259 | True | 651 | lncRNA | 0.45 | 2 | 10295595 | 10296629 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937312 | NA | coding | upstream | 26176 | 10267264 ~ 10269419 (+) |
| LOC110535246 | tm14c | coding | upstream | 120067 | 10171849 ~ 10175528 (+) |
| LOC118937311 | LOC106579630 | coding | upstream | 883318 | 9410878 ~ 9412277 (+) |
| LOC110535239 | LOC106579629 | coding | upstream | 889724 | 9357029 ~ 9405871 (+) |
| LOC100305285 | pdcd6 | coding | upstream | 966012 | 9319032 ~ 9329583 (+) |
| LOC110535248 | LOC106579638 | coding | downstream | 9256 | 10305885 ~ 10367679 (+) |
| LOC110536547 | LOC106579641 | coding | downstream | 98809 | 10395438 ~ 10624020 (+) |
| LOC110535252 | LOC106579643 | coding | downstream | 334735 | 10631364 ~ 10639422 (+) |
| vapa | vapa | coding | downstream | 369578 | 10666207 ~ 10671992 (+) |
| LOC110535262 | LOC106579655 | coding | downstream | 729008 | 11025637 ~ 11064599 (+) |
| G941915 | NA | non-coding | upstream | 10291 | 10278635 ~ 10285304 (+) |
| G941894 | NA | non-coding | upstream | 49234 | 10245989 ~ 10246361 (+) |
| G941838 | NA | non-coding | upstream | 51175 | 10241867 ~ 10244420 (+) |
| G941836 | gcm2 | non-coding | upstream | 54105 | 10239288 ~ 10241490 (+) |
| G941808 | NA | non-coding | upstream | 116812 | 10178229 ~ 10178783 (+) |
| G941968 | NA | non-coding | downstream | 89195 | 10385824 ~ 10386095 (+) |
| G941982 | NA | non-coding | downstream | 102191 | 10398820 ~ 10399079 (+) |
| G941983 | NA | non-coding | downstream | 103790 | 10400419 ~ 10401001 (+) |
| G941996 | NA | non-coding | downstream | 123164 | 10419793 ~ 10420004 (+) |
| G941997 | NA | non-coding | downstream | 123870 | 10420499 ~ 10420742 (+) |
| G941893 | NA | other | upstream | 50089 | 10245109 ~ 10245506 (+) |
| LOC118937463 | NA | other | upstream | 1440158 | 8845565 ~ 8855476 (+) |
| G940376 | NA | other | upstream | 1643074 | 8651504 ~ 8652993 (+) |
| G940313 | NA | other | upstream | 1754728 | 8532540 ~ 8540867 (+) |
| G940247 | NA | other | upstream | 1855820 | 8439480 ~ 8439775 (+) |
| G942702 | NA | other | downstream | 814097 | 11110726 ~ 11111336 (+) |
| G944957 | NA | other | downstream | 3090921 | 13387550 ~ 13394875 (+) |
| G946426 | ramp3 | other | downstream | 3767919 | 14064548 ~ 14065869 (+) |
| LOC110535304 | NA | other | downstream | 3858725 | 14154784 ~ 14202999 (+) |
| G946644 | NA | other | downstream | 4013946 | 14310575 ~ 14314318 (+) |
