G941968


Basic Information

Item Value
gene id G941968
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 10385824 ~ 10386095 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1074304
ACATGAAGTTGCTTTCGTCTAGTTCCAGGTTCCAGATGAGTCTTGTCTCATCAACGTCTAGCAGTGGCTAGAGAGTCGTTTTGCGTCTATCAACGTCATTCTAATCCGAAATAGAATCGTACATATCGAAGTCCACTCAATAGCAAGGCAGTAGCCGTCTGCAGCACCGAGGTGGACAGTGGACACCGGGGTAACGGGACCGTACCAGGGAACTACACCTCACCAAAGCCATATAATAGGTTCTAATTTGCTGTCTCTTTGATGCCTGGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1074304 True 272 lncRNA 0.47 1 10385824 10386095

Neighbor

gene id symbol gene type direction distance location
LOC110535248 LOC106579638 coding upstream 18145 10305885 ~ 10367679 (+)
LOC118937312 NA coding upstream 116405 10267264 ~ 10269419 (+)
LOC110535246 tm14c coding upstream 210296 10171849 ~ 10175528 (+)
LOC118937311 LOC106579630 coding upstream 973547 9410878 ~ 9412277 (+)
LOC110535239 LOC106579629 coding upstream 979953 9357029 ~ 9405871 (+)
LOC110536547 LOC106579641 coding downstream 9343 10395438 ~ 10624020 (+)
LOC110535252 LOC106579643 coding downstream 245269 10631364 ~ 10639422 (+)
vapa vapa coding downstream 280112 10666207 ~ 10671992 (+)
LOC110535262 LOC106579655 coding downstream 639542 11025637 ~ 11064599 (+)
LOC110535263 lrrc30 coding downstream 769585 11155680 ~ 11158395 (+)
G941925 NA non-coding upstream 89195 10295595 ~ 10296629 (+)
G941915 NA non-coding upstream 100520 10278635 ~ 10285304 (+)
G941894 NA non-coding upstream 139463 10245989 ~ 10246361 (+)
G941838 NA non-coding upstream 141404 10241867 ~ 10244420 (+)
G941836 gcm2 non-coding upstream 144334 10239288 ~ 10241490 (+)
G941982 NA non-coding downstream 12725 10398820 ~ 10399079 (+)
G941983 NA non-coding downstream 14324 10400419 ~ 10401001 (+)
G941996 NA non-coding downstream 33698 10419793 ~ 10420004 (+)
G941997 NA non-coding downstream 34404 10420499 ~ 10420742 (+)
G942003 NA non-coding downstream 49463 10435558 ~ 10435766 (+)
G941893 NA other upstream 140318 10245109 ~ 10245506 (+)
LOC118937463 NA other upstream 1530387 8845565 ~ 8855476 (+)
G940376 NA other upstream 1733303 8651504 ~ 8652993 (+)
G940313 NA other upstream 1844957 8532540 ~ 8540867 (+)
G940247 NA other upstream 1946049 8439480 ~ 8439775 (+)
G942702 NA other downstream 724631 11110726 ~ 11111336 (+)
G944957 NA other downstream 3001455 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 3678453 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 3769259 14154784 ~ 14202999 (+)
G946644 NA other downstream 3924480 14310575 ~ 14314318 (+)

Expression


Co-expression Network