G941982


Basic Information

Item Value
gene id G941982
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 10398820 ~ 10399079 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1074319
caaaatatttaagtgccgtTGCACGGGGTAATGTAGTAGgttgccaggcgcaccagtttgagtcaagaactgtaactctgcttggtttttcacactcaacggttttccgtgtgtatcaagaatggtccaacactcaaaggacttccagccaacttgacacaactgtgagaagcattgaagtcaacatgggccagcatccctgtggaacgctttcgacaccttgtagagtccatgccccgacgaattgaggctgttttgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1074319 True 260 lncRNA 0.48 1 10398820 10399079

Neighbor

gene id symbol gene type direction distance location
LOC110535248 LOC106579638 coding upstream 31141 10305885 ~ 10367679 (+)
LOC118937312 NA coding upstream 129401 10267264 ~ 10269419 (+)
LOC110535246 tm14c coding upstream 223292 10171849 ~ 10175528 (+)
LOC118937311 LOC106579630 coding upstream 986543 9410878 ~ 9412277 (+)
LOC110535239 LOC106579629 coding upstream 992949 9357029 ~ 9405871 (+)
LOC110535252 LOC106579643 coding downstream 232285 10631364 ~ 10639422 (+)
vapa vapa coding downstream 267128 10666207 ~ 10671992 (+)
LOC110535262 LOC106579655 coding downstream 626558 11025637 ~ 11064599 (+)
LOC110535263 lrrc30 coding downstream 756601 11155680 ~ 11158395 (+)
LOC110535264 LOC106579657 coding downstream 779253 11178332 ~ 11497838 (+)
G941968 NA non-coding upstream 12725 10385824 ~ 10386095 (+)
G941925 NA non-coding upstream 102191 10295595 ~ 10296629 (+)
G941915 NA non-coding upstream 113516 10278635 ~ 10285304 (+)
G941894 NA non-coding upstream 152459 10245989 ~ 10246361 (+)
G941838 NA non-coding upstream 154400 10241867 ~ 10244420 (+)
G941983 NA non-coding downstream 1340 10400419 ~ 10401001 (+)
G941996 NA non-coding downstream 20714 10419793 ~ 10420004 (+)
G941997 NA non-coding downstream 21420 10420499 ~ 10420742 (+)
G942003 NA non-coding downstream 36479 10435558 ~ 10435766 (+)
G942006 NA non-coding downstream 39660 10438739 ~ 10438949 (+)
G941893 NA other upstream 153314 10245109 ~ 10245506 (+)
LOC118937463 NA other upstream 1543383 8845565 ~ 8855476 (+)
G940376 NA other upstream 1746299 8651504 ~ 8652993 (+)
G940313 NA other upstream 1857953 8532540 ~ 8540867 (+)
G940247 NA other upstream 1959045 8439480 ~ 8439775 (+)
G942702 NA other downstream 711647 11110726 ~ 11111336 (+)
G944957 NA other downstream 2988471 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 3665469 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 3756275 14154784 ~ 14202999 (+)
G946644 NA other downstream 3911496 14310575 ~ 14314318 (+)

Expression


Co-expression Network