XLOC_028582 (btbd11a)


Basic Information

Item Value
gene id XLOC_028582
gene name btbd11a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 11813778 ~ 12007404 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055444
GTGGTTTCGCAGTGAGTGATGCAGTGGTTGGTGAAGGCGTTCCGAGCTCTTGAATTACGCACGCAAAGTTGGGAGCAGAGGCGCGCGTTGGAGATATTTCTTCCCCGGTGACTTACCAAAATACTAAACGAATTGTCAAATTACGCACGCTTGTATTGGCTATTGGTGTTTGCGCGTGTAATTTTGCTGGCTATACATTCCTCTACTGCTTTGAGGAGAGGGCGCGCCACAGGGACGCGCTTTGggctttctttaaaacatcaggCACAAGCCTAACATTATGAGGTGCAGCCATGGCAGGCAAGGGTAAGACAGCGGCGAGGACGCTGGAGGATTTAACGCTCGATTCCGGTTATGGTGGAGCGGCGGATTCCTTCAGGTCGTCCAGCGTGTCGCTCTGTTGCTCGGACACGCATCTGTCGTATGCGCATGGGGGAAACTGCTGGCATCTGACTGAGTCAATGCACAGCAGACACAACAGTTTGGACACGGTCAATACCGTCCTGGCGGAAGACACGGAGATCCTGGAGTGCTCGGGCCAGTGCGCCAAACTGCCCGAGCTGGAGGAGGACGTGCCGTGGAGTCTTGGAGAGGTGGAAGGAGCGCTGCGCAAAGACGAGGAGCTGTGCGTGGGGAACGCGTCGCGGGAGATCCTGGCCAAGCTCTCCGCGCTGGTCAGCCGCGCGCTGGTGAGGATCGCCCGGGAGGCGCAGCGCATGAGTCTGCGTTACGCCAGATGCACCAAGCACGAGATCCAGAGCGCTATCAAGATGGTCCTCTCGTGGACCATCTCCGTGAACTGCATTACTGCGGCGCTCAGCGCGCTGTCGCTTTACAACATGAGCACGGGTGATAAGTTCAGCCGGGGCAAGTCAACCCGATGCGGACTTATCTTCTCCGTGGGAAAGTTCTTCAGGTGGATGGTGGATAGCCGGGTGGCCTTGCGCATCCACGAGCACGCGGCGATCTACCTGAGCGCCTGTATGGAGAGCCTGTTCAGAGAGGTGTTTACCCGGGTGCAGAGGAGCGCGCTGGTGGAGAAGGAGAACGGAGTGCCAAAGTTTTCCGTGGAGTCCCTAGAACAGGCCATAAACAACGACTCGGAGCTGTGGGGTCTTTTGCAGCCGTACCAGCACCTCATTTGTGGCAAGAATGCAAGCGGTGTATTGAGCCTGCCGGACAGTCTGAACCTGCACCGTGACCAGCAGCGAGCAGGGAAAACTGGAGAGGGCCATGCCTATAGCCAGGCTGAACTCCGCACCATTGAACAGTCACTTCTGGCGACCCGTGTGGGGAGCATCGCCGAGCTCAGTGACCTGGTGTCTCGGGCCATGCATCACCTTCAGCCTCTGCACATCAAGAACCCCAGCAATGGCACTCCTGTGCACCAGAACCGCACGGGCTCCGTTCACTGGGAGCCCGAGGCCCTCTATACGCTCTGCTACTTCATGCACTGTCCGCAGATGGAGTGGGAAAACCCTAATGTCGAACCCTCTAAGATCACCCTGCACACGGAGAGGCCGTTCCTGGTACTGCCTCCACTTATGGAGTGGATCCGGGTGGCCGTAGCTCACACTGAACACCGCCGAAGCTTCTCAGTGGACAGTGATGATGTTCGACAGGCGGCTCGACTGCTGTTACCCGGAGTGGACTGTGAGCCGCGGCAGCTCAAAGCAGACGACTGTTTCTGTGCCACACGGAAACTGGACGCTGCGTCCACAGAAGCAAAGTTCCTGCAGGATCTGGGCTTCCGGATGCTCAACTGCGGACGAACTGACCTGGTCAAGCAAGCAGTCAACCTGCTCGGGCCAGATGGCATTAACAGTATGAGTGAACAGGGTATGACCCCTCTGATGTACTCGTGTGTTCGAGGGGATGAAGCCATGGTGCAGATGCTGCTGGACGCTGGAGCTGACATAAACAGTGAGGTGCCCAGCTCACTACACAAGCACCCCTCAGTTTATCCTGACACCAGGCAGGGGACGCCCCTCACATTCGCAGTGTTACACGGACACGTCCCTGTCGTTCAGCTTCTGCTGGATGCCCGAGCGAACGTGGAGGGGGCGATTCAGGAAAGCACAGAGAACTACACGGAGACGCCTCTACAGTTGGCATCTGCGGCAGGCAACTTCGAGCTGGTCAGTTTGCTTTTGGAAAGAGGAGCAGACCCTCTGATTGGCACCACTTACCGGAATGGCATTTCCTCCGGTCCACTGGGTGAAATGAACTCGTACAGCCTTGCAGCAGCACATGGACACAGGAACGTCTTCCGGAAGCTTCTGTCGCAGGTGGAGAAGGACAAGGGGGACGTGTTGTCTCTGGAGGAGATGCTGGCTGAGGGTTCGGAGGCCGTGGAGAGGAGAGCGCCACAGAATGAAGGCACCCTCCGGACAGGCAAGGCCAAACTAAGAGCCCTCCGCGAGGCCATGTACCACAGTGCCGAACACGGCCATGTGGACATTACCATAGACATCCGCAGCCTGGGCGTACCGTGGACCCTACACACATGGCTAGAGTCTCTGAGAACATGTTTCGTGCAGCAGCGGCGGCCACTGATCCAGGGCCTATTGAAGGACTTCAGTTGCATTAAAGAAGACGAGTACACAGAAGAGCTCATCACACACGGACTGCCACTCATGTTCCAGATCCTTCGAGCCAGCAAGAACGAGGTGATCAGCCAGCAGCTCTCAGTCATTTTTACCCAATGCTATGGTCCTTTCCCAATCCCCAAACTCACCGAGATCAAGAAGAAGCAAACGTCTCGCTTGGACCCACACTTTCTCAATAACAAAGAGATGTCTGATGTGACGTTTCTGGTGGAAGGAAAGCCCTTTTATGCCCATAAAGTGCTGCTCTTCACTGCCTCGCCAAGGTTTAAGTCTCTGCTCTCTAACAGACCAGCGGCGGAGAACACATGCATCGAGATCAGTCACGTCAAGTACAACATTTTTCAGCTGGTAATGCAGTACCTCTACTGTGGCGGCACTGAGTCACTGCACATCAGGAACACTGAAATTATGGAGCTCCTGTCTGCAGCCAAGTTCTTCCAACTTGATGCTCTTCAAAGACACTGTGAAATAATCTGCTCCAAGAACATCACCAACGACTCCTGTGTGGACATATACAAACATGCCAGGTTCCTGGGAGCCCTGGAGTTGGCAGGCTTCATCGAGGGCTTTTTCCTGAAGAACATGGTGCTCCTGATTGAGCTGGAGAACTTTAAGCAGCTCCTATATGAGGTCCCTGCAGACAGCCCTGGTCCAGGCCCGTCCTATGATGTCCTCCATGACCTGGAGCAAACCCTGGCCCTGCGGATCCGCTCCATTCATCTTTCCACCTCCAAGGGCTCCATCGTCTGACACATCGTCGCCAAACTCACGCCAACCGTTCCTTACAGCGGTTTCATCGAGTGCTCCATTTTGTGTGCCAACCTACTGGAGACATTTCAAAAATCACCGCCGACGCAATCAAAGGGGGGATTGTGGGGAAAGCCGACGCATTTTACTCCACAGGCTAACATCTCCACCGTGTTGCAGAAACGTCAGCCTGCAGAACTCCATTCCAAGGGCTACGTACGTTACGTTGTGGAAACATTCTAGCAATGTTGTGACAAAGCTAATCGTGCCCAACAAACGTTAGCGCCCAGCCTCTACGGCGATGCATGCAGACGGGTCTGCTTCAATTATAGGTGGAACTGTCTGGGGAACGGTTGTCATGCTACCTACTGCGGACGGTTTTAGGTTATATTACTCTCAAATCAATGTAATATCGTTAGCCTGCCCAATTTGTGTAACATTCCCTGACACTAAACGCTAAGCAAACGATGCATGTTGAGTTTGGTAGGTGATGCTGCCATTACGTTTCCTAAGTGTTCACGTTGGACAAAAGCTCCACTAGATGAAGagttttaaaactaagatgttttatatattaatacTCACATCCAACTACTACTTTTGGTATTTGTGTCACTGAACAATAATATGCCAGCTGTTTAAATCCTAGCACTTGTGTTTTAACGCTTTGCGGTGTTAAGGAATAGGGATTTGCTACCTTCGGTCTTTTGTAGATTGATTCGGCAGACATTATAGTAGACTGAAATTAggttttagtttatatttaatcAACAAAAGTTTACCATGTCCACCGGTGCGTCGGTTCAAAGCAGATCATTTCATCCTAAGGCTGTAACCATGTCTAGTACATTGAGGAGAACTCATTTCTTTTTGAAATGAAACATTGGGAAAATTAGGTCAAATTTTAGTTGGGAAActattttcaaataatattttacaatatgcgCACATATTTGCATTCCTAGTTTGTTAAAAATGCAAAATATCTCCTGTCTTGTCACAATTAGTTAGTAATTTTCAATTCTAATCTAAATTTGAGGACAAAAACTGGATATTACTATTGTTTctgttgtaaaaaatgttttcatataTAATTAATCCAGAGaagaatatatagaatatatagaaGGGAGAATATATAGGtgaatatatgtttttattttcattttttaataaattattgtacAGTAGGCTTGCGCAGtttaaatatgaacaaaaatgGATCTTAACATCAAGTGTAAACATGCCCTTTCTACTTTGCGTACTGTTAAATCAACAAATCCCACCTACTTTTTATTGATTGGCCATCTCAATCATACTTACACTTTCCATTTTTGATTATTTGAGTGCACTTGTCCTCCTCAATGTCTGCATTGGTCACGGCCCTGTTTTAAAAACCCTCCAGTCGACCACTGTGCTTCATACACTCCAAACTGAGCAGTTCATCCTTGCCTTGAGGTCACACCACCTAATCTGCATGGGTCCTGTTTGGAGCTTTTTTGAAATACCAAGCTCATTTTCCTTTCAAGGATGCAGAATTACTTACTAACGCCCTTTTGTGCAGGACTCTATGGTCTTTGTTGCTTGCGAGTGTGTCGAAATTGTGTGTTATGAAAGATGTCATTGCACTGGTCGCTACCTTCATGACCCAATGTACATATTCCCGGTCCTCACCTGCTGCACTGCTTTCGTTCAATGTGAAAAATGTGAAGCCAAGCTGTTTTTAGTGTGCATGTTTTTCCCAGTGTTCGTTCGTAACCCTTCAAGATGTCGGTAAGTTTGAAACTGTACTGGATGTACGATGTTACCAGCAGATGATTATGTTGACAAGCCTGAACCCAAAGTAATAGATTTCGAAGTATGTAAAAGGTGCTGATATACTCATAGCGAAGTTGTTTTTCGTTCTTCGTAAGCAGCGGTTTACGATTAGCAAACATTCAGACGCCATCTACGCAGCTAAGACTTcatttttacaaacaaaatgatcaaaataaactaaaattagtgccaaaaaaagactaaaaactGTAGTTAGAgtagtttaaaatgtttacaatccAAATCTTTTCCCGAAAGCTCTCTTAGATAAGCCATTTTGAACTCCTAAAACCTAATTTCGGATtgattttaaatggaaaaattaGCTTTGAGCAAATCGGCCATCAAGGCATTTCATCCAAAGACTATCTAGATATCAAAATCCCATCCTAATAGTTAGTTATTTGATAATATCCAATCGGTTATCTTACCATAATGTGCTGGTAGTGCTGTCTAAAAGTCCTGTTCTGTTGTATGATTTGTATTTCATGTGCGATTCCGTTTATGAACATCCTGTTAATGGGGAAAGTTGCTAAATTTTAAAACGGAAATACATCCTTTATTGATATGTAGCTTATACTATGGAATAATATCACGatgcaaataatttaaaactgtgaagatgcatttattttaaaaggaatTTAGCATAGTTACTTTATTTTCTTACAAAGTACATTTATTGTGCGATCCCTGTCTGCTATTTTGTGACAAGTCGTCATGATGTATCGCTTTGAGAAGCCGACACAAAAATACAGACGGAGATAAATCGTGTCATTTTAAAAGATTAGACCCGCGCTTATGTCTTCAATACCTGCCGGTTGTGTTCGCggtttaaataatgaaataaaatttggATTTGTTAAAGCAATACTTGCCACAAATGTGTCCATGCAAGGTTAGTGCTCTCGTCTGAGCTGTTACTTGTGCGTAGCATGGATGCTTCTCCATGTAGCCAAATGTAAAGCAGAAGCCAATCTCATGAAGTGTTTGTAAacgctgtacacacacacacacacacacacaaagaaacttGCTCAGTGTTTCCT

Function

symbol description
btbd11a Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of nucleosome. Orthologous to human BTBD11 (BTB domain containing 11).

GO:

id name namespace
GO:0000786 nucleosome cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003677 DNA binding molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050419-142 Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of nucleosome. Orthologous to human BTBD11 (BTB domain containing 11).

Ensembl:

ensembl_id ENSDARG00000063255

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055444 True 6223 mRNA 0.47 17 11813778 12007404

Neighbor

gene id symbol gene type direction distance location
XLOC_028581 cyb5r3 coding downstream 2979 11804675 ~ 11810799 (-)
XLOC_028580 NA coding downstream 10381 11758282 ~ 11803397 (-)
XLOC_028579 NA coding downstream 55736 11754996 ~ 11758042 (-)
XLOC_028578 NA coding downstream 58922 11753630 ~ 11754856 (-)
XLOC_028577 podxl coding downstream 62741 11732156 ~ 11751037 (-)
XLOC_028583 si:dkey-222f8.3 coding upstream 26469 12033873 ~ 12040345 (-)
XLOC_028584 NA coding upstream 48531 12055935 ~ 12056427 (-)
XLOC_028585 NA coding upstream 50404 12057808 ~ 12058631 (-)
XLOC_028586 NA coding upstream 52580 12059984 ~ 12061389 (-)
XLOC_028587 braf coding upstream 67372 12074776 ~ 12102036 (-)
XLOC_028576 BX465862.4 non-coding downstream 121579 11610718 ~ 11692199 (-)
XLOC_028575 dre-mir-29b-2 non-coding downstream 205495 11608196 ~ 11608283 (-)
XLOC_028589 CR792454.1 non-coding upstream 115390 12122794 ~ 12224825 (-)
XLOC_028590 NA non-coding upstream 222622 12230026 ~ 12238811 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000020_05341186_05473274 BTBD11A, BTBD11B, BTBD11 coding CI01000020 null 5341186 ~ 5473274 (+)