G942006


Basic Information

Item Value
gene id G942006
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 10438739 ~ 10438949 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1074343
atttaactaggcaagtcagttaagaacaatttcttattttcaatgacagcctaggaacagtgggttaactgccttgttcaggggcagaacgacagaattttGCCGTGTCAACTCTGGGATTtcatcttgcaacctttcggttacaagtctaacactctaaccactaggctacctgccgccacaaatctgttgttctgcccctgaacaagtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1074343 True 211 lncRNA 0.44 1 10438739 10438949

Neighbor

gene id symbol gene type direction distance location
LOC110535248 LOC106579638 coding upstream 71060 10305885 ~ 10367679 (+)
LOC118937312 NA coding upstream 169320 10267264 ~ 10269419 (+)
LOC110535246 tm14c coding upstream 263211 10171849 ~ 10175528 (+)
LOC118937311 LOC106579630 coding upstream 1026462 9410878 ~ 9412277 (+)
LOC110535239 LOC106579629 coding upstream 1032868 9357029 ~ 9405871 (+)
LOC110535252 LOC106579643 coding downstream 192415 10631364 ~ 10639422 (+)
vapa vapa coding downstream 227258 10666207 ~ 10671992 (+)
LOC110535262 LOC106579655 coding downstream 586688 11025637 ~ 11064599 (+)
LOC110535263 lrrc30 coding downstream 716731 11155680 ~ 11158395 (+)
LOC110535264 LOC106579657 coding downstream 739383 11178332 ~ 11497838 (+)
G942003 NA non-coding upstream 2973 10435558 ~ 10435766 (+)
G941997 NA non-coding upstream 17997 10420499 ~ 10420742 (+)
G941996 NA non-coding upstream 18735 10419793 ~ 10420004 (+)
G941983 NA non-coding upstream 37738 10400419 ~ 10401001 (+)
G941982 NA non-coding upstream 39660 10398820 ~ 10399079 (+)
G942007 NA non-coding downstream 4345 10443294 ~ 10443689 (+)
G942010 NA non-coding downstream 9482 10448431 ~ 10448639 (+)
G942013 NA non-coding downstream 15094 10454043 ~ 10454331 (+)
G942017 NA non-coding downstream 18425 10457374 ~ 10457606 (+)
G942019 NA non-coding downstream 22573 10461522 ~ 10462042 (+)
G941893 NA other upstream 193233 10245109 ~ 10245506 (+)
LOC118937463 NA other upstream 1583302 8845565 ~ 8855476 (+)
G940376 NA other upstream 1786218 8651504 ~ 8652993 (+)
G940313 NA other upstream 1897872 8532540 ~ 8540867 (+)
G940247 NA other upstream 1998964 8439480 ~ 8439775 (+)
G942702 NA other downstream 671777 11110726 ~ 11111336 (+)
G944957 NA other downstream 2948601 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 3625599 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 3716405 14154784 ~ 14202999 (+)
G946644 NA other downstream 3871626 14310575 ~ 14314318 (+)

Expression


Co-expression Network