G942010


Basic Information

Item Value
gene id G942010
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 10448431 ~ 10448639 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1074347
tgtctactcactggaggcttcgtgccacgGATCAtgactggaggcttcgtgccatggatcatcactggaggcttcgtgccatggatcatcactggaggcttcgtgccatggatcatcactggaggcttcgtgccatggatcatcactggaggcttcatgccatgcatcatcactggaggcttcatgccatggttCATAGAGTATAATac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1074347 True 209 lncRNA 0.53 1 10448431 10448639

Neighbor

gene id symbol gene type direction distance location
LOC110535248 LOC106579638 coding upstream 80752 10305885 ~ 10367679 (+)
LOC118937312 NA coding upstream 179012 10267264 ~ 10269419 (+)
LOC110535246 tm14c coding upstream 272903 10171849 ~ 10175528 (+)
LOC118937311 LOC106579630 coding upstream 1036154 9410878 ~ 9412277 (+)
LOC110535239 LOC106579629 coding upstream 1042560 9357029 ~ 9405871 (+)
LOC110535252 LOC106579643 coding downstream 182725 10631364 ~ 10639422 (+)
vapa vapa coding downstream 217568 10666207 ~ 10671992 (+)
LOC110535262 LOC106579655 coding downstream 576998 11025637 ~ 11064599 (+)
LOC110535263 lrrc30 coding downstream 707041 11155680 ~ 11158395 (+)
LOC110535264 LOC106579657 coding downstream 729693 11178332 ~ 11497838 (+)
G942007 NA non-coding upstream 4742 10443294 ~ 10443689 (+)
G942006 NA non-coding upstream 9482 10438739 ~ 10438949 (+)
G942003 NA non-coding upstream 12665 10435558 ~ 10435766 (+)
G941997 NA non-coding upstream 27689 10420499 ~ 10420742 (+)
G941996 NA non-coding upstream 28427 10419793 ~ 10420004 (+)
G942013 NA non-coding downstream 5404 10454043 ~ 10454331 (+)
G942017 NA non-coding downstream 8735 10457374 ~ 10457606 (+)
G942019 NA non-coding downstream 12883 10461522 ~ 10462042 (+)
G942021 NA non-coding downstream 14659 10463298 ~ 10463610 (+)
G942023 NA non-coding downstream 19043 10467682 ~ 10467994 (+)
G941893 NA other upstream 202925 10245109 ~ 10245506 (+)
LOC118937463 NA other upstream 1592994 8845565 ~ 8855476 (+)
G940376 NA other upstream 1795910 8651504 ~ 8652993 (+)
G940313 NA other upstream 1907564 8532540 ~ 8540867 (+)
G940247 NA other upstream 2008656 8439480 ~ 8439775 (+)
G942702 NA other downstream 662087 11110726 ~ 11111336 (+)
G944957 NA other downstream 2938911 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 3615909 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 3706715 14154784 ~ 14202999 (+)
G946644 NA other downstream 3861936 14310575 ~ 14314318 (+)

Expression


Co-expression Network