G942013


Basic Information

Item Value
gene id G942013
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 10454043 ~ 10454331 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1074350
GGGACTGGAACATCTGAGATAGTGTAGTCACAATGTTGAACTGCCCTTGTAATGTGAGGTAAGTCAAAAGTGCGGGTTTagtctcccgagtggcacagcggtctaaggcactgcatgtcagtgctagaggcatcactacagaccctgattcgattccaggctgtatcacaaccggccgtgattgggagtcccatcgaGCAGTGCACAATtgttgttagggtttggccggggtaggccgtcattgtaaataggaatttgttcttaattaagtGGCttacctaattaaata

Function

NR:

description
PREDICTED: uncharacterized protein LOC106611174

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1074350 True 289 lncRNA 0.47 1 10454043 10454331

Neighbor

gene id symbol gene type direction distance location
LOC110535248 LOC106579638 coding upstream 86364 10305885 ~ 10367679 (+)
LOC118937312 NA coding upstream 184624 10267264 ~ 10269419 (+)
LOC110535246 tm14c coding upstream 278515 10171849 ~ 10175528 (+)
LOC118937311 LOC106579630 coding upstream 1041766 9410878 ~ 9412277 (+)
LOC110535239 LOC106579629 coding upstream 1048172 9357029 ~ 9405871 (+)
LOC110535252 LOC106579643 coding downstream 177033 10631364 ~ 10639422 (+)
vapa vapa coding downstream 211876 10666207 ~ 10671992 (+)
LOC110535262 LOC106579655 coding downstream 571306 11025637 ~ 11064599 (+)
LOC110535263 lrrc30 coding downstream 701349 11155680 ~ 11158395 (+)
LOC110535264 LOC106579657 coding downstream 724001 11178332 ~ 11497838 (+)
G942010 NA non-coding upstream 5404 10448431 ~ 10448639 (+)
G942007 NA non-coding upstream 10354 10443294 ~ 10443689 (+)
G942006 NA non-coding upstream 15094 10438739 ~ 10438949 (+)
G942003 NA non-coding upstream 18277 10435558 ~ 10435766 (+)
G941997 NA non-coding upstream 33301 10420499 ~ 10420742 (+)
G942017 NA non-coding downstream 3043 10457374 ~ 10457606 (+)
G942019 NA non-coding downstream 7191 10461522 ~ 10462042 (+)
G942021 NA non-coding downstream 8967 10463298 ~ 10463610 (+)
G942023 NA non-coding downstream 13351 10467682 ~ 10467994 (+)
G942029 NA non-coding downstream 24808 10479139 ~ 10479396 (+)
G941893 NA other upstream 208537 10245109 ~ 10245506 (+)
LOC118937463 NA other upstream 1598606 8845565 ~ 8855476 (+)
G940376 NA other upstream 1801522 8651504 ~ 8652993 (+)
G940313 NA other upstream 1913176 8532540 ~ 8540867 (+)
G940247 NA other upstream 2014268 8439480 ~ 8439775 (+)
G942702 NA other downstream 656395 11110726 ~ 11111336 (+)
G944957 NA other downstream 2933219 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 3610217 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 3701023 14154784 ~ 14202999 (+)
G946644 NA other downstream 3856244 14310575 ~ 14314318 (+)

Expression


Co-expression Network