G942041


Basic Information

Item Value
gene id G942041
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 10496948 ~ 10497215 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1074378
ttcattaaaaatcctacaatgtgattttctggattttatttctcattttgtctgtcatagttgaagtgtacctatgatgaaagttacaggcttctctcatatttttaagtgagagaacttgcacaattggtggctgactaaatacttttttgccccactgtatatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1074378 True 268 lncRNA 0.35 1 10496948 10497215

Neighbor

gene id symbol gene type direction distance location
LOC110535248 LOC106579638 coding upstream 129269 10305885 ~ 10367679 (+)
LOC118937312 NA coding upstream 227529 10267264 ~ 10269419 (+)
LOC110535246 tm14c coding upstream 321420 10171849 ~ 10175528 (+)
LOC118937311 LOC106579630 coding upstream 1084671 9410878 ~ 9412277 (+)
LOC110535239 LOC106579629 coding upstream 1091077 9357029 ~ 9405871 (+)
LOC110535252 LOC106579643 coding downstream 134149 10631364 ~ 10639422 (+)
vapa vapa coding downstream 168992 10666207 ~ 10671992 (+)
LOC110535262 LOC106579655 coding downstream 528422 11025637 ~ 11064599 (+)
LOC110535263 lrrc30 coding downstream 658465 11155680 ~ 11158395 (+)
LOC110535264 LOC106579657 coding downstream 681117 11178332 ~ 11497838 (+)
G942029 NA non-coding upstream 17552 10479139 ~ 10479396 (+)
G942023 NA non-coding upstream 28954 10467682 ~ 10467994 (+)
G942021 NA non-coding upstream 33338 10463298 ~ 10463610 (+)
G942019 NA non-coding upstream 34906 10461522 ~ 10462042 (+)
G942017 NA non-coding upstream 39342 10457374 ~ 10457606 (+)
G942048 NA non-coding downstream 7186 10504401 ~ 10504617 (+)
G942051 NA non-coding downstream 9970 10507185 ~ 10507595 (+)
G942053 NA non-coding downstream 12818 10510033 ~ 10517085 (+)
G942077 NA non-coding downstream 64925 10562140 ~ 10562370 (+)
G942080 NA non-coding downstream 71661 10568876 ~ 10569085 (+)
G941893 NA other upstream 251442 10245109 ~ 10245506 (+)
LOC118937463 NA other upstream 1641511 8845565 ~ 8855476 (+)
G940376 NA other upstream 1844427 8651504 ~ 8652993 (+)
G940313 NA other upstream 1956081 8532540 ~ 8540867 (+)
G940247 NA other upstream 2057173 8439480 ~ 8439775 (+)
G942702 NA other downstream 613511 11110726 ~ 11111336 (+)
G944957 NA other downstream 2890335 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 3567333 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 3658139 14154784 ~ 14202999 (+)
G946644 NA other downstream 3813360 14310575 ~ 14314318 (+)

Expression


Co-expression Network