G942048


Basic Information

Item Value
gene id G942048
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 10504401 ~ 10504617 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1074385
gcagagggaagtgtttagtcccaggatccttaacttagtaatgagctttttggggactatggtgttgatgttgaatgctgagctgtagtcaatgaacagcattctcacatagttcttccttttgtccaggtgggaaagggcagtgtggagtgcaatagagattgtcatcatctgtggatctattggggcggtatgcaaattggagtgggtctagggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1074385 True 217 lncRNA 0.46 1 10504401 10504617

Neighbor

gene id symbol gene type direction distance location
LOC110535248 LOC106579638 coding upstream 136722 10305885 ~ 10367679 (+)
LOC118937312 NA coding upstream 234982 10267264 ~ 10269419 (+)
LOC110535246 tm14c coding upstream 328873 10171849 ~ 10175528 (+)
LOC118937311 LOC106579630 coding upstream 1092124 9410878 ~ 9412277 (+)
LOC110535239 LOC106579629 coding upstream 1098530 9357029 ~ 9405871 (+)
LOC110535252 LOC106579643 coding downstream 126747 10631364 ~ 10639422 (+)
vapa vapa coding downstream 161590 10666207 ~ 10671992 (+)
LOC110535262 LOC106579655 coding downstream 521020 11025637 ~ 11064599 (+)
LOC110535263 lrrc30 coding downstream 651063 11155680 ~ 11158395 (+)
LOC110535264 LOC106579657 coding downstream 673715 11178332 ~ 11497838 (+)
G942041 NA non-coding upstream 7186 10496948 ~ 10497215 (+)
G942029 NA non-coding upstream 25005 10479139 ~ 10479396 (+)
G942023 NA non-coding upstream 36407 10467682 ~ 10467994 (+)
G942021 NA non-coding upstream 40791 10463298 ~ 10463610 (+)
G942019 NA non-coding upstream 42359 10461522 ~ 10462042 (+)
G942051 NA non-coding downstream 2568 10507185 ~ 10507595 (+)
G942053 NA non-coding downstream 5416 10510033 ~ 10517085 (+)
G942077 NA non-coding downstream 57523 10562140 ~ 10562370 (+)
G942080 NA non-coding downstream 64259 10568876 ~ 10569085 (+)
G942084 NA non-coding downstream 76881 10581498 ~ 10582028 (+)
G941893 NA other upstream 258895 10245109 ~ 10245506 (+)
LOC118937463 NA other upstream 1648964 8845565 ~ 8855476 (+)
G940376 NA other upstream 1851880 8651504 ~ 8652993 (+)
G940313 NA other upstream 1963534 8532540 ~ 8540867 (+)
G940247 NA other upstream 2064626 8439480 ~ 8439775 (+)
G942702 NA other downstream 606109 11110726 ~ 11111336 (+)
G944957 NA other downstream 2882933 13387550 ~ 13394875 (+)
G946426 ramp3 other downstream 3559931 14064548 ~ 14065869 (+)
LOC110535304 NA other downstream 3650737 14154784 ~ 14202999 (+)
G946644 NA other downstream 3805958 14310575 ~ 14314318 (+)

Expression


Co-expression Network