XLOC_028584


Basic Information

Item Value
gene id XLOC_028584
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 12055935 ~ 12056427 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00057328
ATgttgtttaatgtatttttttttttttacatttataaaaagcaGGTGCTGAAGTTCAGATGGGTTCATTTGTTATCTAGATGGAGAATCAGCAGtcatAAAAGTAATTGCTGTAGGTCAAAtgggtttatttttcttttcttgagGAGCATCTGGATACAGAATCAGCAGGTAATGGATAAATTTAACGCTCAGGTTAtttatactgttaaaaaataa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00057328 True 219 lncRNA 0.30 2 12055935 12056427

Neighbor

gene id symbol gene type direction distance location
XLOC_028583 si:dkey-222f8.3 coding downstream 15590 12033873 ~ 12040345 (-)
XLOC_028582 btbd11a coding downstream 48531 11813778 ~ 12007404 (-)
XLOC_028581 cyb5r3 coding downstream 245136 11804675 ~ 11810799 (-)
XLOC_028580 NA coding downstream 252538 11758282 ~ 11803397 (-)
XLOC_028579 NA coding downstream 297893 11754996 ~ 11758042 (-)
XLOC_028585 NA coding upstream 1381 12057808 ~ 12058631 (-)
XLOC_028586 NA coding upstream 3557 12059984 ~ 12061389 (-)
XLOC_028587 braf coding upstream 18349 12074776 ~ 12102036 (-)
XLOC_028588 mrps33 coding upstream 45840 12102267 ~ 12106039 (-)
XLOC_028589 CR792454.1 coding upstream 66367 12122794 ~ 12224825 (-)
XLOC_028578 NA non-coding downstream 301079 11753630 ~ 11754856 (-)
XLOC_028576 BX465862.4 non-coding downstream 363736 11610718 ~ 11692199 (-)
XLOC_028575 dre-mir-29b-2 non-coding downstream 447652 11608196 ~ 11608283 (-)
XLOC_028590 NA non-coding upstream 173599 12230026 ~ 12238811 (-)
XLOC_028591 NA non-coding upstream 183707 12240134 ~ 12241573 (-)

Expression


Co-expression Network