XLOC_028585



Basic Information


Item Value
gene id XLOC_028585
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 12057808 ~ 12058631 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00057329
aGGTCAGATGCAGGATATCAGATGGGTTCATTGTCTCCCCCTGTGGTGAATCTCGATGCTGAATGGTTACATTTATTGCtcagatatttatatatttcttattatACCACATGCTTATCATTTACTGCATTAATTTATATTGCATAGAATAAAAagagaaacattttattttgaaatacctaatattaatagttaaatgGTCTTCATCGTGTGATTCcagcatctgaaatgtttttgTGTTTCAGTTTTCTCCATCTGATGTAAAATTGATTGTAAATTGTTGTTAAATTGGTTTAAAGTGTTTTCTAATGTAATTTCTATTAACATTTATGTAAGGCAGATGCTGGAGGTCAGATGGGTTCATTTTCTTCCCCTTGAGGAGCACCTGAAAACAGAATCAGaGGTCAGAATCAGATGCAGGATATCAGATGGGTTTATTGTCTCCCCCCTGTGGAGAATCTGGATGCTGAATGGTTACATTTATATTAcgtttaatatatatgttttaattttacattattctTATCATTTAGTGCATTCATTTATATTGTGTGGGATAAAATag

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00057329 True 565 lncRNA 0.32 2 12057808 12058631

Neighbor


gene id symbol gene type direction distance location
XLOC_028584 NA coding downstream 1381 12055935 ~ 12056427 (-)
XLOC_028583 si:dkey-222f8.3 coding downstream 17463 12033873 ~ 12040345 (-)
XLOC_028582 btbd11a coding downstream 50404 11813778 ~ 12007404 (-)
XLOC_028581 cyb5r3 coding downstream 247009 11804675 ~ 11810799 (-)
XLOC_028580 NA coding downstream 254411 11758282 ~ 11803397 (-)
XLOC_028586 NA coding upstream 1353 12059984 ~ 12061389 (-)
XLOC_028587 braf coding upstream 16145 12074776 ~ 12102036 (-)
XLOC_028588 mrps33 coding upstream 43636 12102267 ~ 12106039 (-)
XLOC_028589 CR792454.1 coding upstream 64163 12122794 ~ 12224825 (-)
XLOC_028590 NA coding upstream 171395 12230026 ~ 12238811 (-)
XLOC_028579 NA non-coding downstream 299766 11754996 ~ 11758042 (-)
XLOC_028578 NA non-coding downstream 302952 11753630 ~ 11754856 (-)
XLOC_028576 BX465862.4 non-coding downstream 365609 11610718 ~ 11692199 (-)
XLOC_028591 NA non-coding upstream 181503 12240134 ~ 12241573 (-)
XLOC_028593 NA non-coding upstream 230134 12288765 ~ 12297450 (-)

Expression



Co-expression Network